e8cf7000d6349acc78093fdcba19b98c *DESCRIPTION
d11d11b95d1e71b80154e1697b914aa9 *NAMESPACE
d85c511eb4bc44f4b4ebb1b47513986a *NEWS.md
a5f4df5ef4820a47c16c8f2c7b815573 *R/POUMM.R
069c9a782d94da0248f964823bc96a5a *R/fitPOUMM.R
6d2049072463918ad620f260db1c9692 *R/likPOUMM.R
8309ffc93fa011d147b7d8b0ed22add2 *R/paramsPOUMM.R
443405b90d90536d7889322a8fd49987 *R/specPOUMM.R
92f2f04754c5edf02bdd15f840387163 *R/summaryPOUMM.R
2671b2e43d98f2c0e309994796af008b *R/utilities.R
69d5c24535f008957278e113a0d8c1e8 *R/vignetteCachedResults.R
086930f9db8e13b702d5527e5777b3cd *README.md
7d02000baa77b3befe25a972cd20ae19 *build/vignette.rds
1ee47ead9ce81f72eb43e493a2600c1c *data/vignetteCachedResults.rda
9b4fb396bf37a53ae9439a704ec917f2 *inst/CITATION
23c1b3231ba9bf25b0d4e8c54029288a *inst/REFERENCES.bib
b160a5881dc4fb65c52713d42e2873f9 *inst/doc/InterpretingPOUMM.R
a0ab63d9c330d6b4b11c20794c27e4bc *inst/doc/InterpretingPOUMM.Rmd
a3946610b1986076aa7cfa4fd4356cd1 *inst/doc/InterpretingPOUMM.html
7ac77339f95e6770a9065c514cb4c0c1 *inst/doc/UserGuide.R
a0d0abe0268d3c0644bf41c6fdf3f873 *inst/doc/UserGuide.Rmd
62e8dc42cec066abbbf03ea4eb3e13a9 *inst/doc/UserGuide.html
49279c53a2a19ec0431fcd6fcd370e21 *man/H2.Rd
10d14cb023088e34d467ac7ad368f417 *man/OU.Rd
4ea745449acb5676f913010d2e31d66d *man/POUMM.Rd
845a36f1193d0c6eeb553ca3f531e001 *man/POUMMIsADevRelease.Rd
7e15948a25adfa083b57f613cfdbf4a3 *man/PhylogeneticH2.Rd
3b9f4d769f31e936ec5ef903d2bd2699 *man/analyseMCMCs.Rd
c0c828ccd5fea170f6f9e85217620e45 *man/chld.Rd
76c5c249ee63b16153a14fbd41fe3173 *man/coef.POUMM.Rd
bbdfc2c21a6a354953a506f9b7a6da59 *man/covFunPOUMM.Rd
afabf1fa128b55c1f4b210bd5d630446 *man/covHPDFunPOUMM.Rd
7a1f3e494fbeb8a1412f620507d39e85 *man/covPOUMM.Rd
69936120803ed3147583557f73ccc80c *man/covVTipsGivenTreePOUMM.Rd
2fd9586aba7f4dee10ffcab74e025f6a *man/dVNodesGivenTreePOUMM.Rd
2dae524e4ea2a819744fd3a065cf129f *man/edgesFrom.Rd
68b0cf916f5f74965f77976bbb5c7e9a *man/fitted.POUMM.Rd
30a73133d7f760f281da2e7bdca9c91f *man/gPOUMM.Rd
7243faacc88942b9e5df8b23d3e6b764 *man/likPOUMMGivenTreeVTips.Rd
f778fbaeb3052a6be2977048d0d9b2d4 *man/likPOUMMGivenTreeVTipsC.Rd
a469d7d8cdda8df322847766a90c0e69 *man/logLik.POUMM.Rd
328613f855a2e3462347f25d9ae24689 *man/loglik_abc_g0_g0Prior.Rd
d74945cca1d4ffabb9fe692fcf114027 *man/maxLikPOUMMGivenTreeVTips.Rd
7f538330c3a2971d0bcef446c89dfca4 *man/mcmcPOUMMGivenPriorTreeVTips.Rd
c25e2b392a16043c27c3f0a3b019b62b *man/nobs.POUMM.Rd
161c3611cf678c317552622bc40e46c3 *man/nodeTimes.Rd
5bdcf64a2712ae5e56bfb3f0e36ddc29 *man/plot.POUMM.Rd
25546d5e136c600cc39c53e549c4cd6b *man/plot.summary.POUMM.Rd
d8f5edb60b445d957b8f8bf4248f0d7e *man/pruneTree.Rd
acf9ea5f572787b21de9a47dc63f18db *man/rTrajectoryOU.Rd
7f3de0565a6f98fd91334765ae3a3240 *man/rTrajectoryOUDef.Rd
12e4a1e617f3ce65a0cf31e0715a5bc2 *man/rVNodesGivenTreePOUMM.Rd
cc0f722d085bdca3cf1aefa58a11d6fc *man/residuals.POUMM.Rd
35792803239fd55b0a5181e60bf092bc *man/simulatePOUMMLikelihoodMainLoop.Rd
a64606b39b3d1c196c9279630fa25837 *man/simulateTrait.Rd
0c7f5c43ba21c0adf41e5257c29168e4 *man/specPOUMM.Rd
7822ae468b5567319525aeb089d6700b *man/statistics.Rd
a313b58542002820f2a6757bc62b4118 *man/summary.POUMM.Rd
f2afe172f8033caee3cb6342d1db8fa1 *man/validateSpecPOUMM.Rd
e5af3c7033d06999a3a8c660558c6183 *man/validateZTree.Rd
12e6f4df9bba5d1cbcdc590c66ba94a0 *man/vignetteCachedResults.Rd
6a0d970040fd5cac6013fe4cbcecd07d *src/AbcPOUMM.h
b3c5faa4a1355ee3e609ea8d89981204 *src/Makevars
7abd016267532f846cb497275a476bca *src/Rcpp.cpp
e9ec28c300ed6f48ab2c51f78704c276 *src/SPLITT.h
5924fa1a31efe05dad65d8016d29f15c *tests/test-all.R
579aa0d9147953f9fec58915f2578e2c *tests/testthat/test-fit.R
c4a94bf317323a0955cb0be5a36212e5 *tests/testthat/test-lik.R
234afac65345a7d896701d364300d62c *tests/testthat/test-parameters.R
013ed5804a22daac98a2935de2787612 *tests/testthat/test-specify.R
a0ab63d9c330d6b4b11c20794c27e4bc *vignettes/InterpretingPOUMM.Rmd
23c1b3231ba9bf25b0d4e8c54029288a *vignettes/REFERENCES.bib
a0d0abe0268d3c0644bf41c6fdf3f873 *vignettes/UserGuide.Rmd
