4feb6d01dccd88f98e76ebcfb42d2560 *DESCRIPTION
96c5588b9d01335cce741c5136ff27e2 *LICENSE
6125b91fb6c788d6b911959dde5b3c94 *NAMESPACE
4f20b845027c04a664ed4fead6d04c64 *NEWS.md
bb049a06487381303f6f676b91b0e684 *R/concatipede.R
27127a0b575c599d74c403e518534829 *R/concatipede_example.R
d199e65f37e340d1d20adddb8d124cc7 *R/concatipede_prepare.R
c5053b96f0c9f19a789e1e9ace0b7a63 *R/find_fasta.R
f3421cca2921055b098f6e08e65af436 *R/get_genbank_table.R
8023be5ed0802c492f6331e737feb27c *R/helper_functions.R
99fc675af55ad1ff99d3213d0d28a54b *R/matching.R
a9e3dbffe30fdf4fd73f541de459753b *R/matching_helpers.R
c96a8fa8370d8212fb8f7c2305b396b3 *R/read_xl.R
2ed5724aa77be79a65c1688cf26566a5 *R/rename_sequences.R
b56ff2b193ecba52f9ec7f3b10cca008 *R/utils-pipe.R
b411291d6596973440cf72e21b3ac564 *R/write_aln.R
eedb8afc827cee5ad285cd07dd4eeb93 *R/write_xl.R
f88e0cc41a61337d84b34d5be9378654 *README.md
c18382bd7805a1485ac801e22be7c80a *build/vignette.rds
b8107978009f3e3ecd670abda03d47e1 *inst/CITATION
e7754fd28b21553e21875f461e4dc609 *inst/doc/Package-usage.R
00b41ede6185ee32b7d5fb2dd2eceab2 *inst/doc/Package-usage.Rmd
815e3466508e225da56cd8992f810eb0 *inst/doc/Package-usage.html
9185b9fa57949a12fea73290a0bef94b *inst/doc/concatipede_scheme.png
541a562aa09396438f8f0cdf0b5131fb *inst/extdata/COI_Macrobiotidae.fas
8bb5c8711682a78e5f686885384868df *inst/extdata/ITS2_Macrobiotidae.fas
15f1393ea63e132797a3c20630ed41f7 *inst/extdata/LSU_Macrobiotidae.fas
61833d6175b40fcc3114fe47c8692dac *inst/extdata/Macrobiotidae_seqnames.xlsx
054bbe11c69bd2d2c80bf39e2f2970b6 *inst/extdata/SSU_Macrobiotidae.fas
ee8c250934d463c40cf2a480ca4c531f *inst/extdata/sequences-test-matching.xlsx
7962d60697e204942ebb5a4eef31c16b *man/auto_match_seqs.Rd
6089ecf2a6c6d0e3603562ee9a06ca8b *man/concatipede.Rd
c4946f66ce74fba27f081cd6aa0f0b7a *man/concatipede_example.Rd
4ce995df1c9f7b4ed60fb7b0856f9e76 *man/concatipede_prepare.Rd
8d0b8bbe0840281ab7b67a665cec7b2e *man/figures/concatipede_hexagon.png
272cd6f56c65e4b0884235158a04ff33 *man/find_fasta.Rd
29a3b4d530132942ffebaae6be2681b2 *man/get_genbank_table.Rd
8f4aad003a999fae004ba9361f9a99d6 *man/pipe.Rd
d85db8663a6e55f7881228560d9be2b1 *man/read_xl.Rd
e056c842711e903b50ba964e63826292 *man/rename_sequences.Rd
88cf1cf3145e454dba4e28d7c0c1a69a *man/write_aln.Rd
8005628c76d8c9afbd975b0907d3b21a *man/write_xl.Rd
a55a198c75153ee8d246429a48a594e3 *tests/testthat.R
dc67afa4dcad0b3c2604ebee31ad61c5 *tests/testthat/test-auto_match_seqs.R
81824ff39467b2d117b94d47f7ab6578 *tests/testthat/test-concatipede.R
014f7421640218dfcc0612656c58b222 *tests/testthat/test-concatipede_prepare.R
21b024e9d9cf8088bfcfaa790a04ae41 *tests/testthat/test-find_fasta.R
d0cbc64b23e79f64567503e1b03d0749 *tests/testthat/test-integration.R
541a562aa09396438f8f0cdf0b5131fb *vignettes/COI_Macrobiotidae.fas
8bb5c8711682a78e5f686885384868df *vignettes/ITS2_Macrobiotidae.fas
15f1393ea63e132797a3c20630ed41f7 *vignettes/LSU_Macrobiotidae.fas
61833d6175b40fcc3114fe47c8692dac *vignettes/Macrobiotidae_seqnames.xlsx
00b41ede6185ee32b7d5fb2dd2eceab2 *vignettes/Package-usage.Rmd
054bbe11c69bd2d2c80bf39e2f2970b6 *vignettes/SSU_Macrobiotidae.fas
9185b9fa57949a12fea73290a0bef94b *vignettes/concatipede_scheme.png
d5a750b65052b5a46ebc691860ab50a5 *vignettes/edited_1.png
8d0e2708cc4900b8582ef7c041d359f9 *vignettes/edited_2.png
293701c18dddda445d09bf52d10ca6fa *vignettes/edited_3.png
909b586d58a30756630c5ffeb214e94b *vignettes/template.png
