651702fb9ed78f374a8fd34de17663a5 *DESCRIPTION
57eb488b406cf8dfa29dc8188a38f573 *NAMESPACE
e962777367051cd9f95eba4f19feed06 *R/aio.R
e7d13f4470fcaab93fbf07849811b821 *R/bmh.R
dcd0ef1f20d0254e1ce9fad0b8287ca1 *R/co.R
bbcb9531e65e83b3070210fde359abbb *R/cs.R
894f999aaa4841d0560ec526c7158437 *R/fastDist.R
a7942f63193e3a03caba7220f6c00aff *R/hh.R
7d19ee6ddc23dabda84da890a2b5d813 *R/hsphase.R
9bfd3a67ab7413b79a3899d5ea669f6c *R/hss.R
b2456c0ebf8f3114ede17c0f2de7f501 *R/imageplot.R
f6c6850768eeee4354368f626c5446d4 *R/impute.R
933553c4d0261380aa94d799c83fe59b *R/namingInferedPedigree.R
458fbcbb16b8c2045994946b35522f73 *R/ohd.R
24d77f3ab014b071c0deb76e77257e96 *R/ohg.R
dc2976b7da61b43d9fcae8928761b5ca *R/para.R
d8cc51b192ed3ddfb8e765f35dc185cf *R/prSimple.R
5fcc9110a40872385a9aa3e7e1f80232 *R/rplot.R
7c35bc507aedfa83aa3a4f29875b9763 *R/rpoh.R
0fb158f31a27ea4d5842d4387cf1af96 *R/rpohhsphase.R
f0727c19ed0e27419f830bb1563dcb7f *R/simulateHalfsib.R
976280f4d1ee98af77a682accba7c70a *R/ssp.R
27b685f0255367940d271ced8614ee17 *build/vignette.rds
168c3c8ce11ecb4ca196ac0978a4953c *data/genotypes.rda
dcfad65640df58767f04322d094f6a84 *data/map.txt.gz
6e2adec868a9c37f3b6d2ae26be8ca73 *data/pedigree.txt.gz
7760e822405e2eded1be3d91e2595490 *demo/00Index
19b72c690e50b30af50a3decd4c93575 *demo/hsphase.R
e37eda9c67ad43e36357545ca689d7f6 *inst/doc/hsphase.R
65ef9a7554fdffd91fb053cf9750fbb3 *inst/doc/hsphase.Rnw
ce06c5e84d694c18ef0f4a42e4a2fb67 *inst/doc/hsphase.pdf
7a51f7edbcb0047264e69bce210fbb8a *man/aio.Rd
068f2092fe2c45b83637ad4b1de45893 *man/bmh.Rd
5785af7e701990b79764d118c57abe58 *man/co.Rd
c61236e705df10af95a586a82974884d *man/cs.Rd
11a24ab5128c93556e677126a23a08f5 *man/genotypes.Rd
6d65a6020ee066f9b6766e43d61f6aa5 *man/hbp.Rd
231c5acc4b08fee565d1a5e864767cce *man/hh.Rd
82beb221e2c0d52f9fce8a7299bdb8c2 *man/hsphase-package.Rd
89c744a42509dd7320a3f55dac7f9624 *man/hss.Rd
6a1d96452657f3e84cd836e043b6bd40 *man/imageplot.Rd
f09376cd812ab63f4fe066c2e89199f2 *man/impute.Rd
daa4439ee544cb4b5737f372a96a7fef *man/map.Rd
9fdb9ed4403ae4bd4fa3542d9fa6f637 *man/ohd.Rd
d53a4405c58136585f484b9543d87d97 *man/ohg.Rd
42941694550307e9aee9bca6bb7b5fd6 *man/para.Rd
fb1ed6acca0b790da654fff176475e6b *man/pedigree.Rd
cf6f5ec89148adb7f2fc94a3db966d0e *man/pedigreeNaming.Rd
73890c6b8e7e6f10e233429725ac5344 *man/phf.Rd
8a82d6d289d9e9207f3e459785a1805f *man/pm.Rd
77c3ccddf131d82b2f971f6ffd85771e *man/readGenotype.Rd
7b2e908f1d24aa6df4e6037f1cd8f4b8 *man/recombinations.Rd
d3aeee78c82c43f49c73989d0cad4702 *man/rplot.Rd
a3e0d894d8f7eb6b07065504125a42a8 *man/rpoh.Rd
4070638740bcc62f05ed2d81868fd6f8 *man/ssp.Rd
a294175a12318779b5d3c81a25a25943 *src/FastDist.cpp
241c74748b7190e58bbfb3dc6ce39e8c *src/FastDist.h
2bea28849539a5a934dc0f86b50e205c *src/Makevars
a73031cbe7d6aaf0bd22e20f6526977d *src/Makevars.win
c696be6cf2c23a93a594ee6527448f08 *src/Ohd.cpp
342a62cc195a0719ba4084d9ae56da77 *src/Ohd.h
69d6dba04e4abb81254404a5ab512314 *src/TypeConversion.cpp
1dd0bf5fe3dbb35a02c71cd36bfe7449 *src/TypeConversion.h
a1ddaea335f233b0cdb1a5776acab0fe *src/block.cpp
ae464d5d08696832a7af845457e7d807 *src/block.h
163eb1bd2f3472ca532c1f65cd76af20 *src/block4Phase.cpp
2085ca476fb7259ebc95928dd310442e *src/block4Phase.h
b6db2f8b5484556fc0d3d211f3fe2715 *src/co.cpp
6618f9b5b9bc98c0c5373b4a24e9e8b9 *src/co.h
ac1ce5593ba91ca09bee5d9f9c7a4fac *src/diag.cpp
e56785e158a1a4505fa8562eab7b81b2 *src/diag.h
6863dc51821c33dcf9dc899fe18e79ba *src/hsp.cpp
c7b1a614b52a602352a6e9211a72ed92 *src/hsp.h
35a0472398544ee9fef397f67e59658e *src/main.cpp
ab2703828920c9bf459344fce6295b63 *src/memory.cpp
6fc989105df8e19021ff908f61c98db8 *src/memory.h
00d780ec7a77d2000f51f599a5407a4e *src/oh.cpp
db89ed7e5ed5f3da77bafcca0f50e69b *src/oh.h
68885771ec99598419c0f2a7f84ae1f9 *src/ohg.cpp
47ce2dc11f764ccd36f01ee731436114 *src/ohg.h
e51b7a6d63882166def909031e26978a *src/swDetect.cpp
0642a1452f22181d6c996af216f6c391 *src/swDetect.h
65ef9a7554fdffd91fb053cf9750fbb3 *vignettes/hsphase.Rnw
