951d0c264ee4be5459907f82b3414f43 *DESCRIPTION
b09a2d877de40269fd1e060163adab1c *LICENSE
49e09fd428150940d3ef391fbcfccce1 *NAMESPACE
693e6de4c796d9dba97c78005d1b7206 *R/calculate_likelihood_negative_tests.R
96ddab49e7cc36d93d6cc6cd310876d3 *R/calculate_posterior_no_infections.R
c7de946502904e4fca306ec638201bde *R/calculate_prior_infections.R
13064833e239c417fa03265def65f2c3 *R/get_expected_total_infections.R
f0a775d8b851d14289962726baf6a757 *R/get_incubation_day_distribution.R
a140adaeebdda46f8300f37098f31912 *R/get_infection_density.R
bb992dac72f5772aee5c99634d0a232d *R/get_infectiousness_density.R
5adc3bce8cc280b57f96fe9d03929834 *R/get_misc_infection_density.R
823d6d5d79861e5c2c0a45d00c8fb7de *R/get_serial_interval_density.R
e7f1e7ca6d9d531b6a37d2acf178b94d *R/get_test_sensitivities.R
80fde5e45211f127830761ef058a4ebf *R/predict_future_infections.R
9006e066aba40602b9c3d436be896b81 *R/utility_functions.R
a9e2d3a03506f4fa74e7b21efdbfacc5 *R/validation_functions.R
57f73d09a36bab9f1b38e8b3f35dbac1 *README.md
8d02bf7842d67882728f16dfa4ad4a3c *build/vignette.rds
8ee475fd46b56b25b21078b110c4c239 *inst/doc/contacts.R
57555383a515cc5cc5091b7a5644622e *inst/doc/contacts.Rmd
195cb30060cff6cbb820836d6c26302a *inst/doc/contacts.html
c95fa178ad31cb21e2830984409e535f *inst/doc/contagious_period.R
672d0eb60a3dce4040577f45a6ad4d06 *inst/doc/contagious_period.Rmd
a8a5d7cd1cfabffb997fa9626f5e492b *inst/doc/contagious_period.html
4c5f6fe7739e2b3ef33b1d37ca3fe2f6 *inst/doc/future_infections.R
b8642d9cf3dc82b11f34f34e9eecf335 *inst/doc/future_infections.Rmd
db15196d7a701daaab5ba2caa7814c06 *inst/doc/future_infections.html
b2a96896966260446c67408aa4df342a *inst/doc/infection_period.R
6b0da844a8e54b20f935b34ab0827711 *inst/doc/infection_period.Rmd
d0e0d8560d352a8d4d9d93765667f6bd *inst/doc/infection_period.html
4d43f1e272fb52f956824b0531a697f0 *inst/doc/risk_assessment_group_quarantine.R
1ec1bc0d4524a60fe9506cd6e30eef39 *inst/doc/risk_assessment_group_quarantine.Rmd
64576c508aac20bf2b3e81bfd3d6a3b1 *inst/doc/risk_assessment_group_quarantine.html
24ca0fb34f2c18e0269105d5f17bd624 *man/calculate_likelihood_negative_tests.Rd
08e7caf0b37fd13262f441637dfe8532 *man/calculate_likelihood_negative_tests_k.Rd
dcb69876b5f2c90bf803dc0b0faf0c61 *man/calculate_posterior_no_infections.Rd
f22e66680e93e7eb52250bc99a589048 *man/calculate_prior_infections.Rd
ab313c6bcaa2998bdbad9e8cd74494f7 *man/generate_data_extended.Rd
f0c9bbeeedf5ebd75ca185cdbc8dc6f5 *man/get_expected_total_infections.Rd
f226136876761e67a1856a7bcd8c0eb1 *man/get_incubation_day_distribution.Rd
7e17d49bdef51a5a461a6329509efb09 *man/get_infection_density.Rd
198caad2e3fa8a0d5874350d4d87248f *man/get_infectiousness_density.Rd
77c8aaba27a0f127fbec0c642674f5cb *man/get_misc_infection_density.Rd
21f185297c8972465edb138a54492695 *man/get_serial_interval_density.Rd
3673fa7687e6eceb9a8cbde41be0fb22 *man/get_test_sensitivities.Rd
07b1823203ca21d6935929cde3cec0f5 *man/p_onePrimaryMore.Rd
cd7b9d005f64348ecb925e15d1daff7a *man/predict_future_infections.Rd
8ce50d49326c7f1e236c001edd52966d *tests/testthat.R
d7c331e658c2bf121238422ed7ac1d84 *tests/testthat/test_calculate_likelihood_negative_tests.R
da3a1e5ab6f3ab976b15bf5f8bd38ef5 *tests/testthat/test_calculate_posterior_no_infections.R
48423576ba3e4c39e4b7fff3c3495457 *tests/testthat/test_calculate_prior_infections.R
030b403a361dffe0cead2c261f2a3aca *tests/testthat/test_get_expected_total_infections.R
01655f3de0b5e175a96243f8e062ba84 *tests/testthat/test_get_incubation_day_distribution.R
66c23b8782885fff48d73254bb634786 *tests/testthat/test_get_infection_density.R
0f65fd8884c15b9b4356e187037530a6 *tests/testthat/test_get_infectiousness_density.R
a1830920fade1ae1d07248bc86565099 *tests/testthat/test_get_misc_infection_density.R
01b829b661bd1f4b59adaa215d3eb695 *tests/testthat/test_get_serial_interval_density.R
2fd2794e891753b3d763988dc82b49b8 *tests/testthat/test_predict_future_infections.R
174f7c46084fec153929505d8e4849bd *tests/testthat/test_validation_functions.R
57555383a515cc5cc5091b7a5644622e *vignettes/contacts.Rmd
672d0eb60a3dce4040577f45a6ad4d06 *vignettes/contagious_period.Rmd
b8642d9cf3dc82b11f34f34e9eecf335 *vignettes/future_infections.Rmd
6b0da844a8e54b20f935b34ab0827711 *vignettes/infection_period.Rmd
40945fdb8e9e30932898ce1c3a2b6746 *vignettes/logo/itwm.png
22717df037f44985a6ea0ff2cc5424bf *vignettes/logo/mevis.png
1ec1bc0d4524a60fe9506cd6e30eef39 *vignettes/risk_assessment_group_quarantine.Rmd
