Last updated on 2026-10-22 23:56:43 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 6.26 | 236.32 | 242.58 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 3.35 | 160.72 | 164.07 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 160.72 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 157.21 | OK | |||
| r-devel-windows-x86_64 | 2.0.2 | 10.00 | 195.00 | 205.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 4.87 | 209.04 | 213.91 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 6.26 | 208.59 | 214.85 | OK | |
| r-release-macos-arm64 | 2.0.2 | 2.00 | 43.00 | 45.00 | OK | |
| r-release-macos-x86_64 | 2.0.2 | 5.00 | 264.00 | 269.00 | OK | |
| r-release-windows-x86_64 | 2.0.2 | 9.00 | 177.00 | 186.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | 2.00 | 64.00 | 66.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.0.2 | 5.00 | 275.00 | 280.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.2 | 12.00 | 243.00 | 255.00 | OK |
Version: 2.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [50s/27s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.7-3
lavaan is FREE software! Please report any bugs.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19:
*** caught segfault ***
address 0x110, cause 'invalid permissions'
tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", {
Traceback:
out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) 1: expect_gt(FCO:::mardia(out$x)[1], 1)lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) expect_gt(FCO:::mardia(out$x)[1], 1)
}) 2:
lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 39: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, eval(code, test_env) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 40: sampling_weights_type = swt_type)eval(code, test_env)
3: 41: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, withCallingHandlers({ wls_v = wls_v, nacov = nacov) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations 4: if (snapshot_skipped) {lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, skip("On CRAN") lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, } sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, else if (!new_expectations && skip_on_empty) { ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) skip_empty()
} 5: }, expectation = handle_expectation, packageNotFoundError = function(e) {lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, if (on_cran()) { std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") skip(paste0("{", e$package, "} is not installed."))
} 6: }, snapshot_on_cran = function(cnd) {eval(sc, parent.frame()) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot") 7: }, skip = handle_skip, warning = handle_warning, message = handle_message, eval(sc, parent.frame()) error = handle_error, interrupt = handle_interrupt)
8:
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 42: std.lv = TRUE, warn = FALSE)doTryCatch(return(expr), name, parentenv, handler)
9: 43: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
10: 44: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, classes, parentenv, handlers)
11: 45: tryCatchList(expr, classes, parentenv, handlers)tryCatch(withCallingHandlers({
eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {12: skip("On CRAN")tryCatch(expr, error = function(e) { } call <- conditionCall(e) else if (!new_expectations && skip_on_empty) { if (!is.null(call)) { skip_empty() } if (identical(call[[1L]], quote(doTryCatch))) }, expectation = handle_expectation, packageNotFoundError = function(e) { call <- sys.call(-4L) if (on_cran()) { dcall <- deparse(call, nlines = 1L) skip(paste0("{", e$package, "} is not installed.")) } prefix <- paste("Error in", dcall, ": ")}, snapshot_on_cran = function(cnd) { LONG <- 75L snapshot_skipped <<- TRUE sm <- strsplit(conditionMessage(e), "\n")[[1L]] invokeRestart("muffle_cran_snapshot") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}, skip = handle_skip, warning = handle_warning, message = handle_message, if (is.na(w)) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b")46: if (w > LONG) doWithOneRestart(return(expr), restart) prefix <- paste0(prefix, "\n ")
}47: else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")withOneRestart(expr, restarts[[1L]]) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {48: cat(msg, file = outFile)withRestarts(tryCatch(withCallingHandlers({ .Internal(printDeferredWarnings()) eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations invisible(structure(msg, class = "try-error", condition = e)) if (snapshot_skipped) {}) skip("On CRAN")
}13: else if (!new_expectations && skip_on_empty) {try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, skip_empty() std.lv = TRUE, warn = FALSE), silent = TRUE) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {14: if (on_cran()) {generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, skip(paste0("{", e$package, "} is not installed.")) free1 = free, s = s, k = k, nf = nf) }
}, snapshot_on_cran = function(cnd) {15: snapshot_skipped <<- TRUEFUN(X[[i]], ...) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 16: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), lapply(X = S, FUN = FUN, ...) end_test = function() {
})17:
doTryCatch(return(expr), name, parentenv, handler)49:
test_code(code = exprs, env = env, reporter = get_reporter() %||% 18: StopReporter$new())tryCatchOne(expr, names, parentenv, handlers[[1L]])
50: 19: source_file(path, env = env(env), desc = desc, shuffle = shuffle, tryCatchList(expr, classes, parentenv, handlers) error_call = error_call)
20: 51: tryCatch(expr, error = function(e) { call <- conditionCall(e)FUN(X[[i]], ...) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 52: call <- sys.call(-4L)lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, dcall <- deparse(call, nlines = 1L) error_call = error_call) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L53: sm <- strsplit(conditionMessage(e), "\n")[[1L]]doTryCatch(return(expr), name, parentenv, handler) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 54: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], tryCatchOne(expr, names, parentenv, handlers[[1L]]) type = "b")
if (w > LONG) 55: prefix <- paste0(prefix, "\n ")tryCatchList(expr, classes, parentenv, handlers) }
else prefix <- "Error : "56: msg <- paste0(prefix, conditionMessage(e), "\n")tryCatch(code, testthat_abort_reporter = function(cnd) { .Internal(seterrmessage(msg[1L])) cat(conditionMessage(cnd), "\n") if (!silent && isTRUE(getOption("show.error.messages"))) { NULL cat(msg, file = outFile)}) .Internal(printDeferredWarnings())
}57: invisible(structure(msg, class = "try-error", condition = e))with_reporter(reporters$multi, lapply(test_paths, test_one_file, }) env = env, desc = desc, shuffle = shuffle, error_call = error_call))
21: 58: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)test_files_serial(test_dir = test_dir, test_package = test_package,
test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, 22: env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) desc = desc, load_package = load_package, shuffle = shuffle,
23: error_call = error_call)FUN(X[[i]], ...)
59: 24: test_files(test_dir = path, test_paths = test_paths, test_package = package, lapply(seq_len(cores), inner.do) reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
25: 60: parallel::mclapply(1:rep, function(r) {test_dir("testthat", package = package, reporter = reporter, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, ..., load_package = "installed") free1 = free, s = s, k = k, nf = nf)
}, mc.cores = cores)61:
26: test_check("FCO")gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
An irrecoverable exception occurred. R is aborting now ...
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14:
Traceback:
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, 1: free1 = free, s = s, k = k, nf = nf)
lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)15:
2: FUN(X[[i]], ...)lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx,
fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, 16: slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, lapply(X = S, FUN = FUN, ...) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
sampling_weights_type = swt_type)17:
doTryCatch(return(expr), name, parentenv, handler) 3:
lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, 18: wls_v = wls_v, nacov = nacov)tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: 4: tryCatchList(expr, classes, parentenv, handlers)lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov,
sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, 20: tryCatch(expr, error = function(e) { ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
call <- conditionCall(e) if (!is.null(call)) { 5: if (identical(call[[1L]], quote(doTryCatch))) lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, call <- sys.call(-4L) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ") 6: eval(sc, parent.frame()) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 7: eval(sc, parent.frame()) if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 8: type = "b")lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE) if (w > LONG)
prefix <- paste0(prefix, "\n ") 9: }doTryCatch(return(expr), name, parentenv, handler) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")10: .Internal(seterrmessage(msg[1L]))tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)
.Internal(printDeferredWarnings())11: tryCatchList(expr, classes, parentenv, handlers) }
invisible(structure(msg, class = "try-error", condition = e))12: })
tryCatch(expr, error = function(e) {21: call <- conditionCall(e) if (!is.null(call)) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
if (identical(call[[1L]], quote(doTryCatch))) 22: call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) prefix <- paste("Error in", dcall, ": ")
23: LONG <- 75LFUN(X[[i]], ...) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")24: lapply(seq_len(cores), inner.do) if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 25: type = "b")parallel::mclapply(1:rep, function(r) { if (w > LONG) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, prefix <- paste0(prefix, "\n ") free1 = free, s = s, k = k, nf = nf) }}, mc.cores = cores) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")26: .Internal(seterrmessage(msg[1L]))gen_fit(mod1 = mod, x = bb1992, rep = 10) if (!silent && isTRUE(getOption("show.error.messages"))) {
27: cat(msg, file = outFile)eval(code, test_env)
.Internal(printDeferredWarnings())28: }eval(code, test_env) invisible(structure(msg, class = "try-error", condition = e))})
29:
withCallingHandlers({ eval(code, test_env)13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { std.lv = TRUE, warn = FALSE), silent = TRUE) skip("On CRAN") }
else if (!new_expectations && skip_on_empty) {14: skip_empty()generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, } free1 = free, s = s, k = k, nf = nf)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {15: skip(paste0("{", e$package, "} is not installed."))FUN(X[[i]], ...)
}16: }, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUElapply(X = S, FUN = FUN, ...) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 17: error = handle_error, interrupt = handle_interrupt)doTryCatch(return(expr), name, parentenv, handler)
18: 30: tryCatchOne(expr, names, parentenv, handlers[[1L]])
doTryCatch(return(expr), name, parentenv, handler)
31: 19: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, classes, parentenv, handlers)
32: 20: tryCatchList(expr, classes, parentenv, handlers)tryCatch(expr, error = function(e) {
33: call <- conditionCall(e)tryCatch(withCallingHandlers({ if (!is.null(call)) { eval(code, test_env) if (identical(call[[1L]], quote(doTryCatch))) new_expectations <- the$test_expectations > starting_expectations call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (snapshot_skipped) { prefix <- paste("Error in", dcall, ": ") LONG <- 75L skip("On CRAN") sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") } if (is.na(w)) else if (!new_expectations && skip_on_empty) { skip_empty() w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], } type = "b") if (w > LONG) }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { prefix <- paste0(prefix, "\n ") skip(paste0("{", e$package, "} is not installed.")) } } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")}, snapshot_on_cran = function(cnd) { .Internal(seterrmessage(msg[1L])) snapshot_skipped <<- TRUE if (!silent && isTRUE(getOption("show.error.messages"))) { invokeRestart("muffle_cran_snapshot") cat(msg, file = outFile)}, skip = handle_skip, warning = handle_warning, message = handle_message, .Internal(printDeferredWarnings()) } error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
invisible(structure(msg, class = "try-error", condition = e))34: })doWithOneRestart(return(expr), restart)
21: 35: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)withOneRestart(expr, restarts[[1L]])
22: 36: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
withRestarts(tryCatch(withCallingHandlers({23: eval(code, test_env)FUN(X[[i]], ...) new_expectations <- the$test_expectations > starting_expectations
24: if (snapshot_skipped) {lapply(seq_len(cores), inner.do) skip("On CRAN")
}25: parallel::mclapply(1:rep, function(r) { else if (!new_expectations && skip_on_empty) { skip_empty() generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, } free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {26: skip(paste0("{", e$package, "} is not installed."))gen_fit(mod1 = mod, x = bb1992, rep = 10) }
27: eval(code, test_env)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE28: eval(code, test_env) invokeRestart("muffle_cran_snapshot")
29: }, skip = handle_skip, warning = handle_warning, message = handle_message, withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal), eval(code, test_env) end_test = function() { new_expectations <- the$test_expectations > starting_expectations }) if (snapshot_skipped) {
skip("On CRAN")37: }test_code(code, parent.frame()) else if (!new_expectations && skip_on_empty) {
skip_empty()38: test_that("Is the seed set properly?", { }}, expectation = handle_expectation, packageNotFoundError = function(e) { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) if (on_cran()) { out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) skip(paste0("{", e$package, "} is not installed.")) } expect_equal(out1$seed, out2$seed)}, snapshot_on_cran = function(cnd) {}) snapshot_skipped <<- TRUE
39: invokeRestart("muffle_cran_snapshot")eval(code, test_env)}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
40:
eval(code, test_env)30:
doTryCatch(return(expr), name, parentenv, handler)41:
31: withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {32: skip("On CRAN") }tryCatchList(expr, classes, parentenv, handlers) else if (!new_expectations && skip_on_empty) {
33: skip_empty()tryCatch(withCallingHandlers({ }}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { } skip_empty()}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { error = handle_error, interrupt = handle_interrupt) skip(paste0("{", e$package, "} is not installed."))
}42: }, snapshot_on_cran = function(cnd) {doTryCatch(return(expr), name, parentenv, handler) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 43: tryCatchOne(expr, names, parentenv, handlers[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
44: 34: tryCatchList(expr, classes, parentenv, handlers)doWithOneRestart(return(expr), restart)
35: 45: withOneRestart(expr, restarts[[1L]])
tryCatch(withCallingHandlers({ eval(code, test_env)36: new_expectations <- the$test_expectations > starting_expectationswithRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) if (snapshot_skipped) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") skip("On CRAN") } } else if (!new_expectations && skip_on_empty) { else if (!new_expectations && skip_on_empty) { skip_empty() skip_empty() } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE}, skip = handle_skip, warning = handle_warning, message = handle_message, invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), error = handle_error, interrupt = handle_interrupt), error = handle_fatal) end_test = function() {
})46:
doWithOneRestart(return(expr), restart)37:
47: test_code(code, parent.frame())withOneRestart(expr, restarts[[1L]])
48: 38: test_that("Is the seed set properly?", {withRestarts(tryCatch(withCallingHandlers({ out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) eval(code, test_env) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) new_expectations <- the$test_expectations > starting_expectations expect_equal(out1$seed, out2$seed) if (snapshot_skipped) { skip("On CRAN")})
}39: else if (!new_expectations && skip_on_empty) {eval(code, test_env) skip_empty()
}40: }, expectation = handle_expectation, packageNotFoundError = function(e) {eval(code, test_env) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))41: }withCallingHandlers({}, snapshot_on_cran = function(cnd) { eval(code, test_env) snapshot_skipped <<- TRUE new_expectations <- the$test_expectations > starting_expectations invokeRestart("muffle_cran_snapshot") if (snapshot_skipped) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip("On CRAN") error = handle_error, interrupt = handle_interrupt), error = handle_fatal), } end_test = function() { else if (!new_expectations && skip_on_empty) { }) skip_empty() }
}, expectation = handle_expectation, packageNotFoundError = function(e) {49: if (on_cran()) {test_code(code = exprs, env = env, reporter = get_reporter() %||% skip(paste0("{", e$package, "} is not installed.")) StopReporter$new()) }
}, snapshot_on_cran = function(cnd) {50: snapshot_skipped <<- TRUEsource_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)51:
FUN(X[[i]], ...)42:
52: doTryCatch(return(expr), name, parentenv, handler)lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle,
error_call = error_call)43:
53: tryCatchOne(expr, names, parentenv, handlers[[1L]])doTryCatch(return(expr), name, parentenv, handler)
44:
tryCatchList(expr, classes, parentenv, handlers)
54: 45: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatch(withCallingHandlers({
55: eval(code, test_env)tryCatchList(expr, classes, parentenv, handlers) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) { skip("On CRAN")56: }tryCatch(code, testthat_abort_reporter = function(cnd) { else if (!new_expectations && skip_on_empty) { cat(conditionMessage(cnd), "\n") skip_empty() NULL }})
}, expectation = handle_expectation, packageNotFoundError = function(e) {57: if (on_cran()) {with_reporter(reporters$multi, lapply(test_paths, test_one_file, skip(paste0("{", e$package, "} is not installed.")) env = env, desc = desc, shuffle = shuffle, error_call = error_call)) }
}, snapshot_on_cran = function(cnd) {58: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")test_files_serial(test_dir = test_dir, test_package = test_package, }, skip = handle_skip, warning = handle_warning, message = handle_message, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
desc = desc, load_package = load_package, shuffle = shuffle, 46: error_call = error_call)doWithOneRestart(return(expr), restart)
59: 47: withOneRestart(expr, restarts[[1L]])test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, 48: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, withRestarts(tryCatch(withCallingHandlers({ load_package = load_package, parallel = parallel, shuffle = shuffle) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations60: if (snapshot_skipped) {test_dir("testthat", package = package, reporter = reporter, skip("On CRAN") ..., load_package = "installed") }
else if (!new_expectations && skip_on_empty) {61: skip_empty()test_check("FCO") }
}, expectation = handle_expectation, packageNotFoundError = function(e) {An irrecoverable exception occurred. R is aborting now ...
if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
Traceback:
1: 9: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)doTryCatch(return(expr), name, parentenv, handler)
2:
lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, 10: fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, tryCatchOne(expr, names, parentenv, handlers[[1L]]) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
11: unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], tryCatchList(expr, classes, parentenv, handlers) sampling_weights_type = swt_type)
12: 3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)tryCatch(expr, error = function(e) {
4: call <- conditionCall(e)lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, if (!is.null(call)) { sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, if (identical(call[[1L]], quote(doTryCatch))) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L) 5: prefix <- paste("Error in", dcall, ": ")lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, LONG <- 75L std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 6: if (is.na(w)) eval(sc, parent.frame()) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b") 7: if (w > LONG) eval(sc, parent.frame()) prefix <- paste0(prefix, "\n ")
8: }lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, else prefix <- "Error : " std.lv = TRUE, warn = FALSE) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L])) 9: if (!silent && isTRUE(getOption("show.error.messages"))) {doTryCatch(return(expr), name, parentenv, handler) cat(msg, file = outFile)
10: .Internal(printDeferredWarnings())tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
invisible(structure(msg, class = "try-error", condition = e))11: })tryCatchList(expr, classes, parentenv, handlers)
12: 13: tryCatch(expr, error = function(e) {try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, call <- conditionCall(e) std.lv = TRUE, warn = FALSE), silent = TRUE)
if (!is.null(call)) {14: if (identical(call[[1L]], quote(doTryCatch))) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, call <- sys.call(-4L) free1 = free, s = s, k = k, nf = nf) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ") LONG <- 75L15: sm <- strsplit(conditionMessage(e), "\n")[[1L]]FUN(X[[i]], ...) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 16: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lapply(X = S, FUN = FUN, ...) type = "b")
if (w > LONG) 17: prefix <- paste0(prefix, "\n ")doTryCatch(return(expr), name, parentenv, handler) }
else prefix <- "Error : "18: msg <- paste0(prefix, conditionMessage(e), "\n")tryCatchOne(expr, names, parentenv, handlers[[1L]]) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {19: cat(msg, file = outFile)tryCatchList(expr, classes, parentenv, handlers) .Internal(printDeferredWarnings())
}20: invisible(structure(msg, class = "try-error", condition = e))})tryCatch(expr, error = function(e) {
call <- conditionCall(e)13: if (!is.null(call)) {try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)14: dcall <- deparse(call, nlines = 1L)generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf) prefix <- paste("Error in", dcall, ": ")
15: LONG <- 75LFUN(X[[i]], ...) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 16: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lapply(X = S, FUN = FUN, ...) type = "b")
if (w > LONG) 17: prefix <- paste0(prefix, "\n ")doTryCatch(return(expr), name, parentenv, handler) }
else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")18: .Internal(seterrmessage(msg[1L]))tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings())
}19: tryCatchList(expr, classes, parentenv, handlers) invisible(structure(msg, class = "try-error", condition = e))
})20:
tryCatch(expr, error = function(e) {21: call <- conditionCall(e) if (!is.null(call)) {try(lapply(X = S, FUN = FUN, ...), silent = TRUE) if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)22: dcall <- deparse(call, nlines = 1L)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) prefix <- paste("Error in", dcall, ": ") LONG <- 75L
23: sm <- strsplit(conditionMessage(e), "\n")[[1L]]FUN(X[[i]], ...) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")
if (is.na(w)) 24: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lapply(seq_len(cores), inner.do) type = "b")
if (w > LONG) 25: prefix <- paste0(prefix, "\n ")parallel::mclapply(1:rep, function(r) { } generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, else prefix <- "Error : " free1 = free, s = s, k = k, nf = nf) msg <- paste0(prefix, conditionMessage(e), "\n")}, mc.cores = cores) .Internal(seterrmessage(msg[1L]))
if (!silent && isTRUE(getOption("show.error.messages"))) {26: cat(msg, file = outFile)gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) .Internal(printDeferredWarnings())
}27: invisible(structure(msg, class = "try-error", condition = e))eval(code, test_env)})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)28:
eval(code, test_env)22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
29:
withCallingHandlers({23: eval(code, test_env)FUN(X[[i]], ...) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {
skip("On CRAN")24: } else if (!new_expectations && skip_on_empty) {lapply(seq_len(cores), inner.do) skip_empty()
}25: parallel::mclapply(1:rep, function(r) {}, expectation = handle_expectation, packageNotFoundError = function(e) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, if (on_cran()) { free1 = free, s = s, k = k, nf = nf) skip(paste0("{", e$package, "} is not installed."))}, mc.cores = cores) }
}, snapshot_on_cran = function(cnd) {26: snapshot_skipped <<- TRUEgen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 27: error = handle_error, interrupt = handle_interrupt)eval(code, test_env)
30: 28: doTryCatch(return(expr), name, parentenv, handler)eval(code, test_env)
29: 31: withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations32: if (snapshot_skipped) {tryCatchList(expr, classes, parentenv, handlers) skip("On CRAN")
} else if (!new_expectations && skip_on_empty) {33: skip_empty()tryCatch(withCallingHandlers({ } eval(code, test_env)}, expectation = handle_expectation, packageNotFoundError = function(e) { new_expectations <- the$test_expectations > starting_expectations if (on_cran()) { if (snapshot_skipped) { skip(paste0("{", e$package, "} is not installed.")) skip("On CRAN") } }}, snapshot_on_cran = function(cnd) { else if (!new_expectations && skip_on_empty) { snapshot_skipped <<- TRUE skip_empty() invokeRestart("muffle_cran_snapshot") }}, skip = handle_skip, warning = handle_warning, message = handle_message, }, expectation = handle_expectation, packageNotFoundError = function(e) { error = handle_error, interrupt = handle_interrupt) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed.")) }30: }, snapshot_on_cran = function(cnd) {doTryCatch(return(expr), name, parentenv, handler)
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")31: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchOne(expr, names, parentenv, handlers[[1L]]) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
32: 34: tryCatchList(expr, classes, parentenv, handlers)doWithOneRestart(return(expr), restart)
33: tryCatch(withCallingHandlers({35: eval(code, test_env)withOneRestart(expr, restarts[[1L]]) new_expectations <- the$test_expectations > starting_expectations
36: if (snapshot_skipped) {withRestarts(tryCatch(withCallingHandlers({ skip("On CRAN") } eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations else if (!new_expectations && skip_on_empty) { if (snapshot_skipped) { skip_empty() skip("On CRAN") }}, expectation = handle_expectation, packageNotFoundError = function(e) { } else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip_empty() skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 34: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), doWithOneRestart(return(expr), restart) end_test = function() {
})
35: withOneRestart(expr, restarts[[1L]])
36: 37: withRestarts(tryCatch(withCallingHandlers({test_code(code, parent.frame()) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations38: if (snapshot_skipped) {test_that("Is the seed set properly?", { skip("On CRAN") } out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) else if (!new_expectations && skip_on_empty) { out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) skip_empty() expect_equal(out1$seed, out2$seed)}) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {39: if (on_cran()) {eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) }
}, snapshot_on_cran = function(cnd) {40: eval(code, test_env) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")41: }, skip = handle_skip, warning = handle_warning, message = handle_message, withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal), eval(code, test_env) end_test = function() { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { }) skip("On CRAN")
}37: else if (!new_expectations && skip_on_empty) {test_code(code, parent.frame()) skip_empty()
}38: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_that("Is the seed set properly?", { if (on_cran()) { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) skip(paste0("{", e$package, "} is not installed.")) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) } expect_equal(out1$seed, out2$seed)}, snapshot_on_cran = function(cnd) {}) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")39: }, skip = handle_skip, warning = handle_warning, message = handle_message, eval(code, test_env) error = handle_error, interrupt = handle_interrupt)
40: 42: eval(code, test_env)doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])41:
withCallingHandlers({44: eval(code, test_env)tryCatchList(expr, classes, parentenv, handlers) new_expectations <- the$test_expectations > starting_expectations
45: if (snapshot_skipped) { skip("On CRAN")tryCatch(withCallingHandlers({ } else if (!new_expectations && skip_on_empty) { eval(code, test_env) skip_empty() new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip("On CRAN") if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) else if (!new_expectations && skip_on_empty) { skip_empty() } }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed.")) }}, skip = handle_skip, warning = handle_warning, message = handle_message, }, snapshot_on_cran = function(cnd) { error = handle_error, interrupt = handle_interrupt) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 42: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
doTryCatch(return(expr), name, parentenv, handler)46: doWithOneRestart(return(expr), restart)
43: 47: tryCatchOne(expr, names, parentenv, handlers[[1L]])withOneRestart(expr, restarts[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
48: 45: withRestarts(tryCatch(withCallingHandlers({tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations eval(code, test_env) if (snapshot_skipped) { new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") skip("On CRAN") } } else if (!new_expectations && skip_on_empty) { else if (!new_expectations && skip_on_empty) { skip_empty() skip_empty() } }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) {}, expectation = handle_expectation, packageNotFoundError = function(e) { skip(paste0("{", e$package, "} is not installed.")) if (on_cran()) { } skip(paste0("{", e$package, "} is not installed."))}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, snapshot_on_cran = function(cnd) { invokeRestart("muffle_cran_snapshot") snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
46: end_test = function() {doWithOneRestart(return(expr), restart) })
47: 49: test_code(code = exprs, env = env, reporter = get_reporter() %||% withOneRestart(expr, restarts[[1L]])
StopReporter$new())48:
withRestarts(tryCatch(withCallingHandlers({50: eval(code, test_env)source_file(path, env = env(env), desc = desc, shuffle = shuffle, new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { error_call = error_call) skip("On CRAN")
}51: else if (!new_expectations && skip_on_empty) {FUN(X[[i]], ...)
skip_empty()52: }lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {53: skip(paste0("{", e$package, "} is not installed."))doTryCatch(return(expr), name, parentenv, handler) }
}, snapshot_on_cran = function(cnd) {54: snapshot_skipped <<- TRUEtryCatchOne(expr, names, parentenv, handlers[[1L]]) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 55: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), tryCatchList(expr, classes, parentenv, handlers) end_test = function() {
})
56: tryCatch(code, testthat_abort_reporter = function(cnd) {49: test_code(code = exprs, env = env, reporter = get_reporter() %||% cat(conditionMessage(cnd), "\n") StopReporter$new()) NULL
50: })source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)57:
with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))51:
FUN(X[[i]], ...)58:
test_files_serial(test_dir = test_dir, test_package = test_package, 52: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) error_call = error_call)
53:
doTryCatch(return(expr), name, parentenv, handler)59:
test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, 54: stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, tryCatchOne(expr, names, parentenv, handlers[[1L]]) load_package = load_package, parallel = parallel, shuffle = shuffle)
55: 60: test_dir("testthat", package = package, reporter = reporter, tryCatchList(expr, classes, parentenv, handlers)
..., load_package = "installed")56:
tryCatch(code, testthat_abort_reporter = function(cnd) {61: cat(conditionMessage(cnd), "\n")test_check("FCO") NULL
})An irrecoverable exception occurred. R is aborting now ...
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L)
Traceback:
dcall <- deparse(call, nlines = 1L) 1: prefix <- paste("Error in", dcall, ": ")lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]] 2: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, if (is.na(w)) fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, type = "b") unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], if (w > LONG) sampling_weights_type = swt_type) prefix <- paste0(prefix, "\n ")
} 3: else prefix <- "Error : "lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, msg <- paste0(prefix, conditionMessage(e), "\n") wls_v = wls_v, nacov = nacov) .Internal(seterrmessage(msg[1L]))
4: if (!silent && isTRUE(getOption("show.error.messages"))) {lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, cat(msg, file = outFile) lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, .Internal(printDeferredWarnings()) sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, } ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) invisible(structure(msg, class = "try-error", condition = e))
}) 5:
lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, 13: std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 6: eval(sc, parent.frame()) std.lv = TRUE, warn = FALSE), silent = TRUE)
7: 14: eval(sc, parent.frame())generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod,
free1 = free, s = s, k = k, nf = nf) 8:
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 15: std.lv = TRUE, warn = FALSE)FUN(X[[i]], ...)
9: 16: doTryCatch(return(expr), name, parentenv, handler)
lapply(X = S, FUN = FUN, ...)10:
tryCatchOne(expr, names, parentenv, handlers[[1L]])17:
doTryCatch(return(expr), name, parentenv, handler)11:
tryCatchList(expr, classes, parentenv, handlers)18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])12:
tryCatch(expr, error = function(e) { call <- conditionCall(e)19: if (!is.null(call)) {tryCatchList(expr, classes, parentenv, handlers)
if (identical(call[[1L]], quote(doTryCatch))) 20: call <- sys.call(-4L)tryCatch(expr, error = function(e) { dcall <- deparse(call, nlines = 1L) call <- conditionCall(e) prefix <- paste("Error in", dcall, ": ") if (!is.null(call)) { LONG <- 75L if (identical(call[[1L]], quote(doTryCatch))) sm <- strsplit(conditionMessage(e), "\n")[[1L]] call <- sys.call(-4L) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") dcall <- deparse(call, nlines = 1L) if (is.na(w)) prefix <- paste("Error in", dcall, ": ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], LONG <- 75L type = "b") sm <- strsplit(conditionMessage(e), "\n")[[1L]] if (w > LONG) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") prefix <- paste0(prefix, "\n ") if (is.na(w)) } w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], else prefix <- "Error : " type = "b") msg <- paste0(prefix, conditionMessage(e), "\n") if (w > LONG) .Internal(seterrmessage(msg[1L])) prefix <- paste0(prefix, "\n ") if (!silent && isTRUE(getOption("show.error.messages"))) { } cat(msg, file = outFile) else prefix <- "Error : " .Internal(printDeferredWarnings()) msg <- paste0(prefix, conditionMessage(e), "\n") } .Internal(seterrmessage(msg[1L])) invisible(structure(msg, class = "try-error", condition = e)) if (!silent && isTRUE(getOption("show.error.messages"))) {}) cat(msg, file = outFile)
13: .Internal(printDeferredWarnings())try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE) }
invisible(structure(msg, class = "try-error", condition = e))14: })generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod,
free1 = free, s = s, k = k, nf = nf)21:
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)15:
FUN(X[[i]], ...)22:
sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))16:
lapply(X = S, FUN = FUN, ...)23: FUN(X[[i]], ...)
17: 24: doTryCatch(return(expr), name, parentenv, handler)lapply(seq_len(cores), inner.do)
18: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])parallel::mclapply(1:rep, function(r) {
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, 19: free1 = free, s = s, k = k, nf = nf)tryCatchList(expr, classes, parentenv, handlers)}, mc.cores = cores)
20: 26: tryCatch(expr, error = function(e) {gen_fit(mod1 = mod, x = bb1992, rep = 10) call <- conditionCall(e)
27: if (!is.null(call)) {eval(code, test_env) if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)28: dcall <- deparse(call, nlines = 1L)eval(code, test_env) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L29: sm <- strsplit(conditionMessage(e), "\n")[[1L]]withCallingHandlers({ w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") eval(code, test_env) if (is.na(w)) new_expectations <- the$test_expectations > starting_expectations w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (snapshot_skipped) { type = "b") skip("On CRAN") if (w > LONG) } else if (!new_expectations && skip_on_empty) { prefix <- paste0(prefix, "\n ") skip_empty() } } else prefix <- "Error : "}, expectation = handle_expectation, packageNotFoundError = function(e) { msg <- paste0(prefix, conditionMessage(e), "\n") if (on_cran()) { .Internal(seterrmessage(msg[1L])) skip(paste0("{", e$package, "} is not installed.")) if (!silent && isTRUE(getOption("show.error.messages"))) { } cat(msg, file = outFile)}, snapshot_on_cran = function(cnd) { .Internal(printDeferredWarnings()) snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot") invisible(structure(msg, class = "try-error", condition = e))}, skip = handle_skip, warning = handle_warning, message = handle_message, }) error = handle_error, interrupt = handle_interrupt)
21: 30: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)doTryCatch(return(expr), name, parentenv, handler)
22: 31: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))tryCatchOne(expr, names, parentenv, handlers[[1L]])
23: 32: FUN(X[[i]], ...)tryCatchList(expr, classes, parentenv, handlers)
24: 33: lapply(seq_len(cores), inner.do)tryCatch(withCallingHandlers({
eval(code, test_env)25: new_expectations <- the$test_expectations > starting_expectationsparallel::mclapply(1:rep, function(r) { if (snapshot_skipped) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, skip("On CRAN") free1 = free, s = s, k = k, nf = nf) }}, mc.cores = cores) else if (!new_expectations && skip_on_empty) {
skip_empty()26: }gen_fit(mod1 = mod, x = bb1992, rep = 10)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {27: skip(paste0("{", e$package, "} is not installed."))eval(code, test_env) }
}, snapshot_on_cran = function(cnd) {28: snapshot_skipped <<- TRUEeval(code, test_env) invokeRestart("muffle_cran_snapshot")
29: }, skip = handle_skip, warning = handle_warning, message = handle_message, withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
eval(code, test_env)34: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {doWithOneRestart(return(expr), restart) skip("On CRAN")
}35: else if (!new_expectations && skip_on_empty) {withOneRestart(expr, restarts[[1L]]) skip_empty()
}36: }, expectation = handle_expectation, packageNotFoundError = function(e) {withRestarts(tryCatch(withCallingHandlers({ if (on_cran()) { eval(code, test_env) skip(paste0("{", e$package, "} is not installed.")) new_expectations <- the$test_expectations > starting_expectations } if (snapshot_skipped) {}, snapshot_on_cran = function(cnd) { skip("On CRAN") snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot") else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip_empty() error = handle_error, interrupt = handle_interrupt) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {30: if (on_cran()) {doTryCatch(return(expr), name, parentenv, handler) skip(paste0("{", e$package, "} is not installed."))
}31: }, snapshot_on_cran = function(cnd) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")32: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatchList(expr, classes, parentenv, handlers) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {33: })tryCatch(withCallingHandlers({
eval(code, test_env)37: new_expectations <- the$test_expectations > starting_expectationstest_code(code = exprs, env = env, reporter = get_reporter() %||% if (snapshot_skipped) { StopReporter$new())
skip("On CRAN") }38: else if (!new_expectations && skip_on_empty) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, skip_empty() error_call = error_call) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {39: if (on_cran()) {FUN(X[[i]], ...) skip(paste0("{", e$package, "} is not installed."))
}40: }, snapshot_on_cran = function(cnd) {lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") error_call = error_call)}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt), error = handle_fatal)41:
doTryCatch(return(expr), name, parentenv, handler)
34: 42: doWithOneRestart(return(expr), restart)tryCatchOne(expr, names, parentenv, handlers[[1L]])
35: 43: withOneRestart(expr, restarts[[1L]])tryCatchList(expr, classes, parentenv, handlers)
36: 44: withRestarts(tryCatch(withCallingHandlers({tryCatch(code, testthat_abort_reporter = function(cnd) { eval(code, test_env) cat(conditionMessage(cnd), "\n") new_expectations <- the$test_expectations > starting_expectations NULL if (snapshot_skipped) {}) skip("On CRAN")
} else if (!new_expectations && skip_on_empty) { skip_empty()45: }with_reporter(reporters$multi, lapply(test_paths, test_one_file, }, expectation = handle_expectation, packageNotFoundError = function(e) { env = env, desc = desc, shuffle = shuffle, error_call = error_call)) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed.")) }46: test_files_serial(test_dir = test_dir, test_package = test_package, }, snapshot_on_cran = function(cnd) { test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, snapshot_skipped <<- TRUE env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, invokeRestart("muffle_cran_snapshot") desc = desc, load_package = load_package, shuffle = shuffle, }, skip = handle_skip, warning = handle_warning, message = handle_message, error_call = error_call) error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() {
})
47: 37: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
load_package = load_package, parallel = parallel, shuffle = shuffle)38: source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)48: test_dir("testthat", package = package, reporter = reporter,
..., load_package = "installed")39: FUN(X[[i]], ...)
40: 49: test_check("FCO")lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle,
error_call = error_call)An irrecoverable exception occurred. R is aborting now ...
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
*** caught segfault ***
address 0x110, cause 'invalid permissions'
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file,
Traceback:
1: env = env, desc = desc, shuffle = shuffle, error_call = error_call))lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
46:
2: test_files_serial(test_dir = test_dir, test_package = test_package, lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, desc = desc, load_package = load_package, shuffle = shuffle, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, error_call = error_call) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
47: sampling_weights_type = swt_type)test_files(test_dir = path, test_paths = test_paths, test_package = package,
reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 3: load_package = load_package, parallel = parallel, shuffle = shuffle)lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions,
wls_v = wls_v, nacov = nacov)48:
test_dir("testthat", package = package, reporter = reporter, 4: ..., load_package = "installed")lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata,
lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, 49: sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, test_check("FCO") ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
An irrecoverable exception occurred. R is aborting now ...
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
Traceback:
1: 15: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)FUN(X[[i]], ...)
2: 16: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, lapply(X = S, FUN = FUN, ...) fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure,
slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, 17: unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], doTryCatch(return(expr), name, parentenv, handler) sampling_weights_type = swt_type)
18: 3: tryCatchOne(expr, names, parentenv, handlers[[1L]])lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions,
wls_v = wls_v, nacov = nacov)19:
tryCatchList(expr, classes, parentenv, handlers) 4:
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, 20: lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, tryCatch(expr, error = function(e) { sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, call <- conditionCall(e) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 5: call <- sys.call(-4L)lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ") 6: LONG <- 75Leval(sc, parent.frame()) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 7: if (is.na(w)) eval(sc, parent.frame()) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b") 8: if (w > LONG) lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, prefix <- paste0(prefix, "\n ") std.lv = TRUE, warn = FALSE) }
else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") 9: .Internal(seterrmessage(msg[1L]))doTryCatch(return(expr), name, parentenv, handler) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)10: .Internal(printDeferredWarnings())tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
invisible(structure(msg, class = "try-error", condition = e))})11:
tryCatchList(expr, classes, parentenv, handlers)21:
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)12:
tryCatch(expr, error = function(e) {22: call <- conditionCall(e)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
if (!is.null(call)) {23: if (identical(call[[1L]], quote(doTryCatch))) FUN(X[[i]], ...) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L)24: prefix <- paste("Error in", dcall, ": ")lapply(seq_len(cores), inner.do) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]]25: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")parallel::mclapply(1:rep, function(r) { if (is.na(w)) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], free1 = free, s = s, k = k, nf = nf) type = "b")}, mc.cores = cores) if (w > LONG)
prefix <- paste0(prefix, "\n ")26: }gen_fit(mod1 = mod, x = bb1992, rep = 10) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")27: .Internal(seterrmessage(msg[1L]))eval(code, test_env) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)28: .Internal(printDeferredWarnings())eval(code, test_env) }
invisible(structure(msg, class = "try-error", condition = e))29: })withCallingHandlers({ eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations13: if (snapshot_skipped) {try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, skip("On CRAN") std.lv = TRUE, warn = FALSE), silent = TRUE) }
else if (!new_expectations && skip_on_empty) {14: skip_empty()generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, } free1 = free, s = s, k = k, nf = nf)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {15: skip(paste0("{", e$package, "} is not installed."))FUN(X[[i]], ...) }
}, snapshot_on_cran = function(cnd) {16: lapply(X = S, FUN = FUN, ...) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")17: }, skip = handle_skip, warning = handle_warning, message = handle_message, doTryCatch(return(expr), name, parentenv, handler) error = handle_error, interrupt = handle_interrupt)
30: 18: doTryCatch(return(expr), name, parentenv, handler)
tryCatchOne(expr, names, parentenv, handlers[[1L]])31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])19:
tryCatchList(expr, classes, parentenv, handlers)32:
tryCatchList(expr, classes, parentenv, handlers)20:
tryCatch(expr, error = function(e) {33: call <- conditionCall(e)tryCatch(withCallingHandlers({ if (!is.null(call)) { eval(code, test_env) if (identical(call[[1L]], quote(doTryCatch))) new_expectations <- the$test_expectations > starting_expectations call <- sys.call(-4L) if (snapshot_skipped) { dcall <- deparse(call, nlines = 1L) skip("On CRAN") prefix <- paste("Error in", dcall, ": ") } LONG <- 75L else if (!new_expectations && skip_on_empty) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] skip_empty() w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") } if (is.na(w)) }, expectation = handle_expectation, packageNotFoundError = function(e) { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (on_cran()) { type = "b") skip(paste0("{", e$package, "} is not installed.")) if (w > LONG) } prefix <- paste0(prefix, "\n ")}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE else prefix <- "Error : " invokeRestart("muffle_cran_snapshot") msg <- paste0(prefix, conditionMessage(e), "\n")}, skip = handle_skip, warning = handle_warning, message = handle_message, .Internal(seterrmessage(msg[1L])) error = handle_error, interrupt = handle_interrupt), error = handle_fatal) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)34: .Internal(printDeferredWarnings())doWithOneRestart(return(expr), restart) }
invisible(structure(msg, class = "try-error", condition = e))})35:
withOneRestart(expr, restarts[[1L]])21:
try(lapply(X = S, FUN = FUN, ...), silent = TRUE)36:
withRestarts(tryCatch(withCallingHandlers({22: eval(code, test_env)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {23: FUN(X[[i]], ...) skip("On CRAN")
}24: else if (!new_expectations && skip_on_empty) { skip_empty()lapply(seq_len(cores), inner.do) }
25: }, expectation = handle_expectation, packageNotFoundError = function(e) {parallel::mclapply(1:rep, function(r) { if (on_cran()) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, skip(paste0("{", e$package, "} is not installed.")) free1 = free, s = s, k = k, nf = nf) }}, mc.cores = cores)}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, 26: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), gen_fit(mod1 = mod, x = bb1992, rep = 10) end_test = function() { })
27: 37: eval(code, test_env)test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
28: 38: eval(code, test_env)source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call)29:
withCallingHandlers({39: eval(code, test_env)FUN(X[[i]], ...) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, skip("On CRAN") error_call = error_call) }
41: else if (!new_expectations && skip_on_empty) { skip_empty()doTryCatch(return(expr), name, parentenv, handler) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {42: if (on_cran()) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip(paste0("{", e$package, "} is not installed."))
43: }tryCatchList(expr, classes, parentenv, handlers)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE44: invokeRestart("muffle_cran_snapshot")tryCatch(code, testthat_abort_reporter = function(cnd) {}, skip = handle_skip, warning = handle_warning, message = handle_message, cat(conditionMessage(cnd), "\n") error = handle_error, interrupt = handle_interrupt) NULL
})30:
doTryCatch(return(expr), name, parentenv, handler)45:
with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])46:
test_files_serial(test_dir = test_dir, test_package = test_package, 32: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, tryCatchList(expr, classes, parentenv, handlers) env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)33:
tryCatch(withCallingHandlers({47: eval(code, test_env)test_files(test_dir = path, test_paths = test_paths, test_package = package, new_expectations <- the$test_expectations > starting_expectations reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, if (snapshot_skipped) { load_package = load_package, parallel = parallel, shuffle = shuffle) skip("On CRAN")
}48: test_dir("testthat", package = package, reporter = reporter, else if (!new_expectations && skip_on_empty) { ..., load_package = "installed") skip_empty()
}49: test_check("FCO")}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {An irrecoverable exception occurred. R is aborting now ...
skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), dv.cutoff = 0.9)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64