Last updated on 2025-01-17 17:48:23 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.2 | 3.87 | 68.02 | 71.89 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.2 | 3.09 | 44.51 | 47.60 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.2 | 123.27 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.2 | 109.17 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.2 | 6.00 | 80.00 | 86.00 | OK | |
| r-patched-linux-x86_64 | 1.0.2 | 3.75 | 60.02 | 63.77 | OK | |
| r-release-linux-x86_64 | 1.0.2 | 3.76 | 60.64 | 64.40 | ERROR | |
| r-release-macos-arm64 | 1.0.2 | 34.00 | OK | |||
| r-release-macos-x86_64 | 1.0.2 | 52.00 | OK | |||
| r-release-windows-x86_64 | 1.0.2 | 7.00 | 78.00 | 85.00 | ERROR | |
| r-oldrel-macos-arm64 | 1.0.2 | 40.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.0.2 | 68.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.0.2 | 7.00 | 91.00 | 98.00 | OK |
Version: 1.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [29s/35s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [16s/20s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [47s/185s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
OMP: Warning #96: Cannot form a team with 8 threads, using 2 instead.
OMP: Hint Consider unsetting KMP_DEVICE_THREAD_LIMIT (KMP_ALL_THREADS), KMP_TEAMS_THREAD_LIMIT, and OMP_THREAD_LIMIT (if any are set).
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [42s/52s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [24s/28s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 2 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.0.2
Check: tests
Result: ERROR
Running 'testthat.R' [22s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(ForestTools)
>
> test_check("ForestTools")
[ FAIL 16 | WARN 0 | SKIP 0 | PASS 43 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test_glcm_internal.R:67:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.29166666666667 | 1.29166666666667 [6]
[7] 1.03993055555556 | 1.03993055555556 [7]
[8] 0.719532554257095 | 0.719532554257095 [8]
- 2.58333333333333 [9]
── Failure ('test_glcm_internal.R:68:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1434988179669 | 13.1434988179669 [6]
[7] 42.3200700277764 | 42.3200700277764 [7]
[8] 0.930178604767005 | 0.930178604767005 [8]
- 26.2869976359338 [9]
── Failure ('test_glcm_internal.R:69:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3875510204081 | 15.3875510204081 [6]
[7] 85.2810286963765 | 85.2810286963765 [7]
[8] 0.0195225863576815 | 0.0195225863576815 [8]
- 30.7751020408163 [9]
── Failure ('test_glcm_internal.R:70:3'): 0 degree GLCM metrics ────────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars0") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:76:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 0.839506172839506 | 0.839506172839506 [7]
[8] 0.735294117647059 | 0.735294117647059 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:77:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2294685990338 | 13.2294685990338 [6]
[7] 42.8362330509463 | 42.8362330509463 [7]
[8] 0.843353524583834 | 0.843353524583834 [8]
- 26.4589371980676 [9]
── Failure ('test_glcm_internal.R:78:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3496459808414 | 15.3496459808414 [6]
[7] 85.1320167426421 | 85.1320167426421 [7]
[8] -0.00613755233092562 | -0.00613755233092562 [8]
- 30.6992919616826 [9]
── Failure ('test_glcm_internal.R:79:3'): 45 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars45") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
── Failure ('test_glcm_internal.R:85:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.16666666666667 | 1.16666666666667 [6]
[7] 0.972222222222222 | 0.972222222222222 [7]
[8] 0.485714285714286 | 0.485714285714286 [8]
- 2.33333333333333 [9]
── Failure ('test_glcm_internal.R:86:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.1424858223062 | 13.1424858223062 [6]
[7] 42.5314463726724 | 42.5314463726724 [7]
[8] 0.888634608157374 | 0.888634608157374 [8]
- 26.2849716446125 [9]
── Failure ('test_glcm_internal.R:87:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3314285714286 | 15.3314285714286 [6]
[7] 85.2921959183674 | 85.2921959183674 [7]
[8] 0.0234960846239587 | 0.0234960846239587 [8]
- 30.6628571428571 [9]
── Failure ('test_glcm_internal.R:88:3'): 90 degree GLCM metrics ───────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars90") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 33.25 1
`expected[6:9]`: 9.5 33.25 1 19
── Failure ('test_glcm_internal.R:94:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("hallbey135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 1.22222222222222 | 1.22222222222222 [6]
[7] 1.06172839506173 | 1.06172839506173 [7]
[8] 0.162790697674419 | 0.162790697674419 [8]
- 2.44444444444444 [9]
── Failure ('test_glcm_internal.R:95:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("tumor135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 13.2299516908213 | 13.2299516908213 [6]
[7] 42.8316632826904 | 42.8316632826904 [7]
[8] 0.862939448271703 | 0.862939448271703 [8]
- 26.4599033816425 [9]
── Failure ('test_glcm_internal.R:96:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("noise135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
actual | expected
[6] 15.3513119533528 | 15.3513119533528 [6]
[7] 85.1695828268834 | 85.1695828268834 [7]
[8] -0.0290198479483709 | -0.0290198479483709 [8]
- 30.7026239067056 [9]
── Failure ('test_glcm_internal.R:97:3'): 135 degree GLCM metrics ──────────────
GLCMTextures::glcm_metrics(...) (`actual`) not equal to read_validation_metrics("bars135") (`expected`).
`names(actual)[6:8]`: "glcm_mean" "glcm_variance" "glcm_correlation"
`names(expected)[6:9]`: "glcm_mean" "glcm_variance" "glcm_correlation" "glcm_SA"
`actual[6:8]`: 9.5 30.25 0.983471074380165
`expected[6:9]`: 9.5 30.25 0.983471074380165 19
[ FAIL 16 | WARN 0 | SKIP 0 | PASS 43 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64