CRAN Package Check Results for Package SimRVSequences

Last updated on 2019-11-18 18:48:33 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.0 11.29 152.59 163.88 OK
r-devel-linux-x86_64-debian-gcc 0.2.0 10.36 115.48 125.84 ERROR
r-devel-linux-x86_64-fedora-clang 0.2.0 185.17 OK
r-devel-linux-x86_64-fedora-gcc 0.2.0 191.09 OK
r-devel-windows-ix86+x86_64 0.2.0 37.00 221.00 258.00 OK
r-patched-linux-x86_64 0.2.0 12.07 139.16 151.23 OK
r-patched-solaris-x86 0.2.0 287.60 OK
r-release-linux-x86_64 0.2.0 11.15 136.74 147.89 OK
r-release-windows-ix86+x86_64 0.2.0 18.00 203.00 221.00 OK
r-release-osx-x86_64 0.2.0 OK
r-oldrel-windows-ix86+x86_64 0.2.0 14.00 144.00 158.00 OK
r-oldrel-osx-x86_64 0.2.0 OK

Check Details

Version: 0.2.0
Check: examples
Result: ERROR
    Running examples in ‘SimRVSequences-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: load_1KG
    > ### Title: Load pre-formatted 1000 Genomes Project exon data
    > ### Aliases: load_1KG
    >
    > ### ** Examples
    >
    > exdata = load_1KG(21:22)
    Warning in open.connection(file, "rt") :
     cannot open URL 'https://github.com/simrvprojects/1000-Genomes-Exon-Data/raw/master/Formatted-SNVdata/SampleData.csv': HTTP status was '504 Gateway Timeout'
    Error in open.connection(file, "rt") :
     cannot open the connection to 'https://github.com/simrvprojects/1000-Genomes-Exon-Data/raw/master/Formatted-SNVdata/SampleData.csv'
    Calls: load_1KG -> read.csv -> read.table -> open -> open.connection
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘SimRVSequences.Rmd’ using rmarkdown
    Quitting from lines 503-513 (SimRVSequences.Rmd)
    Error: processing vignette 'SimRVSequences.Rmd' failed with diagnostics:
    cannot open the connection to 'https://github.com/simrvprojects/1000-Genomes-Exon-Data/raw/master/Formatted-SNVdata/SNVdata_chrom21.rda'
    --- failed re-building ‘SimRVSequences.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘SimRVSequences.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc