Last updated on 2025-12-09 23:51:47 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| JANE | 1 | 2 | 10 |
Current CRAN status: ERROR: 1, NOTE: 2, OK: 10
Version: 2.1.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [16m/90m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(JANE)
+-------------------------------------------+
| ___ ________ ________ _______ |
| |\ \|\ __ \|\ ___ \|\ ___ \ |
| \ \ \ \ \|\ \ \ \\ \ \ \ __/| |
| __ \ \ \ \ __ \ \ \\ \ \ \ \_|/__ |
||\ \\_\ \ \ \ \ \ \ \\ \ \ \ \_|\ \ |
|\ \________\ \__\ \__\ \__\\ \__\ \_______\|
| \|________|\|__|\|__|\|__| \|__|\|_______||
+-------------------------------------------+ version 2.1.0
Type 'citation("JANE")' for citing this R package in publications.
>
> test_check("JANE")
7 isolate(s) removed
$BIC_model
[1] 4707.572
$BIC_mbc
[1] 314.4298
$ICL_mbc
[1] 314.4298
$Total_BIC
[1] 5022.002
$Total_ICL
[1] 5022.002
4 isolate(s) removed
$BIC_model
[1] 3608.544
$BIC_mbc
[1] 274.4463
$ICL_mbc
[1] 274.4463
$Total_BIC
[1] 3882.99
$Total_ICL
[1] 3882.99
1 isolate(s) removed
$BIC_model
[1] 6943.171
$BIC_mbc
[1] 552.4021
$ICL_mbc
[1] 552.4021
$Total_BIC
[1] 7495.574
$Total_ICL
[1] 7495.574
2 isolate(s) removed
$BIC_model
[1] 6027.077
$BIC_mbc
[1] 397.5365
$ICL_mbc
[1] 397.5365
$Total_BIC
[1] 6424.614
$Total_ICL
[1] 6424.614
8 isolate(s) removed
$BIC_model
[1] 5588.837
$BIC_mbc
[1] 135.4871
$ICL_mbc
[1] 135.4871
$Total_BIC
[1] 5724.324
$Total_ICL
[1] 5724.324
No isolates to remove
$BIC_model
[1] 15732.11
$BIC_mbc
[1] -296.6752
$ICL_mbc
[1] -296.6752
$Total_BIC
[1] 15435.44
$Total_ICL
[1] 15435.44
3 isolate(s) removed
$BIC_model
[1] 3753.492
$BIC_mbc
[1] 219.868
$ICL_mbc
[1] 219.868
$Total_BIC
[1] 3973.36
$Total_ICL
[1] 3973.36
4 isolate(s) removed
$BIC_model
[1] -34952.86
$BIC_mbc
[1] 241.6288
$ICL_mbc
[1] 241.6288
$Total_BIC
[1] -34711.23
$Total_ICL
[1] -34711.23
1 isolate(s) removed
$BIC_model
[1] -29971.03
$BIC_mbc
[1] 263.3513
$ICL_mbc
[1] 263.3513
$Total_BIC
[1] -29707.68
$Total_ICL
[1] -29707.68
4 isolate(s) removed
$BIC_model
[1] 7969
$BIC_mbc
[1] 321.3746
$ICL_mbc
[1] 321.3746
$Total_BIC
[1] 8290.375
$Total_ICL
[1] 8290.375
7 isolate(s) removed
$BIC_model
[1] 8438.659
$BIC_mbc
[1] 358.1017
$ICL_mbc
[1] 358.1017
$Total_BIC
[1] 8796.76
$Total_ICL
[1] 8796.76
1 isolate(s) removed
$BIC_model
[1] 17087.57
$BIC_mbc
[1] 271.5205
$ICL_mbc
[1] 271.5205
$Total_BIC
[1] 17359.09
$Total_ICL
[1] 17359.09
1 isolate(s) removed
$BIC_model
[1] 6620.352
$BIC_mbc
[1] 46.66056
$ICL_mbc
[1] 46.66056
$Total_BIC
[1] 6667.012
$Total_ICL
[1] 6667.012
3 isolate(s) removed
$BIC_model
[1] -1739.29
$BIC_mbc
[1] 377.5446
$ICL_mbc
[1] 377.5446
$Total_BIC
[1] -1361.745
$Total_ICL
[1] -1361.745
No isolates to remove
$BIC_model
[1] -7811.868
$BIC_mbc
[1] 326.2705
$ICL_mbc
[1] 326.2705
$Total_BIC
[1] -7485.597
$Total_ICL
[1] -7485.597
2 isolate(s) removed
$BIC_model
[1] 9038.947
$BIC_mbc
[1] -32.70101
$ICL_mbc
[1] -32.70101
$Total_BIC
[1] 9006.246
$Total_ICL
[1] 9006.246
7 isolate(s) removed
$BIC_model
[1] 11307.29
$BIC_mbc
[1] 17.83606
$ICL_mbc
[1] 17.83606
$Total_BIC
[1] 11325.12
$Total_ICL
[1] 11325.12
No isolates to remove
$BIC_model
[1] 23270.2
$BIC_mbc
[1] 83.43346
$ICL_mbc
[1] 83.43346
$Total_BIC
[1] 23353.64
$Total_ICL
[1] 23353.64
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Combinations of K and D considered:
K D
[1,] 3 2
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
7 isolate(s) removed
2 isolate(s) removed
3 isolate(s) removed
6 isolate(s) removed
6 isolate(s) removed
9 isolate(s) removed
2 isolate(s) removed
No isolates to remove
No isolates to remove
3 isolate(s) removed
2 isolate(s) removed
4 isolate(s) removed
6 isolate(s) removed
3 isolate(s) removed
3 isolate(s) removed
1 isolate(s) removed
1 isolate(s) removed
1 isolate(s) removed
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
No isolates to remove
No isolates to remove
No isolates to remove
7 isolate(s) removed
2 isolate(s) removed
4 isolate(s) removed
6 isolate(s) removed
3 isolate(s) removed
6 isolate(s) removed
5 isolate(s) removed
1 isolate(s) removed
5 isolate(s) removed
8 isolate(s) removed
3 isolate(s) removed
4 isolate(s) removed
2 isolate(s) removed
3 isolate(s) removed
1 isolate(s) removed
No isolates to remove
1 isolate(s) removed
1 isolate(s) removed
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Combinations of K and D considered:
K D
[1,] 5 3
No isolates to remove
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Combinations of K and D considered:
K D
[1,] 5 3
Rownames/colnames for A missing or not unique, generating node IDs 1:100
Combinations of K and D considered:
K D
[1,] 3 2
[2,] 5 3
Saving _problems/test-specify_priors-147.R
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 27 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-specify_priors.R:39:4'): specify_priors works ────────────────
Expected `{ ... }` not to throw any errors.
Actually got a <FutureInterruptError> with message:
A future ('future_lapply-1') of class SequentialFuture was interrupted at 2025-12-09T13:32:15, while running on 'gannet.stats.ox.ac.uk' (pid 751649)
[ FAIL 1 | WARN 5 | SKIP 0 | PASS 27 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 2.1.0
Check: installed package size
Result: NOTE
installed size is 9.6Mb
sub-directories of 1Mb or more:
libs 9.1Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64