Last updated on 2025-12-07 11:50:15 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.4.0 | 56.49 | 667.16 | 723.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.4.0 | 0.31 | 2.38 | 2.69 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.4.0 | 133.00 | 1054.64 | 1187.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.4.0 | 121.00 | 1040.20 | 1161.20 | OK | |
| r-devel-windows-x86_64 | 2.4.0 | 52.00 | 673.00 | 725.00 | OK | |
| r-patched-linux-x86_64 | 2.4.0 | 53.37 | 642.44 | 695.81 | OK | |
| r-release-linux-x86_64 | 2.4.0 | 53.70 | 639.90 | 693.60 | OK | |
| r-release-macos-arm64 | 2.4.0 | OK | ||||
| r-release-macos-x86_64 | 2.4.0 | 60.00 | 473.00 | 533.00 | OK | |
| r-release-windows-x86_64 | 2.4.0 | 53.00 | 666.00 | 719.00 | OK | |
| r-oldrel-macos-arm64 | 2.4.0 | OK | ||||
| r-oldrel-macos-x86_64 | 2.4.0 | 58.00 | 487.00 | 545.00 | ERROR | |
| r-oldrel-windows-x86_64 | 2.4.0 | 75.00 | 851.00 | 926.00 | OK |
Version: 2.4.0
Check: package dependencies
Result: ERROR
Packages required but not available: 'airr', 'alakazam', 'ggtree', 'shazam'
Packages suggested but not available for checking: 'knitr', 'rmarkdown'
VignetteBuilder package required for checking but not installed: ‘knitr’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.4.0
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘pwalign’
Flavor: r-oldrel-macos-x86_64
Version: 2.4.0
Check: examples
Result: ERROR
Running examples in ‘dowser-Ex.R’ failed
The error most likely occurred in:
> ### Name: maskCodons
> ### Title: 'maskCodons' Masks codons split by insertions
> ### Aliases: maskCodons
>
> ### ** Examples
>
> s = "ATCATCATC..."
> q = "ATCTTTATCATC"
> print(maskCodons(1,q,s,TRUE))
Error in loadNamespace(x) : there is no package called ‘pwalign’
Calls: print ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavor: r-oldrel-macos-x86_64