Last updated on 2025-12-07 12:50:24 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.0 | 35.16 | 166.78 | 201.94 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.2.0 | 27.66 | 95.01 | 122.67 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.2.0 | 88.00 | 238.71 | 326.71 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.2.0 | 156.00 | 183.59 | 339.59 | OK | |
| r-devel-windows-x86_64 | 1.2.0 | 44.00 | 182.00 | 226.00 | OK | |
| r-patched-linux-x86_64 | 1.2.0 | 37.10 | 153.36 | 190.46 | OK | |
| r-release-linux-x86_64 | 1.2.0 | 37.85 | 155.11 | 192.96 | OK | |
| r-release-macos-arm64 | 1.2.0 | OK | ||||
| r-release-macos-x86_64 | 1.2.0 | 25.00 | 146.00 | 171.00 | OK | |
| r-release-windows-x86_64 | 1.2.0 | 45.00 | 178.00 | 223.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.2.0 | 24.00 | 144.00 | 168.00 | OK | |
| r-oldrel-windows-x86_64 | 1.2.0 | 55.00 | 242.00 | 297.00 | OK |
Version: 1.2.0
Check: examples
Result: ERROR
Running examples in ‘inferCSN-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_dynamic_networks
> ### Title: Plot dynamic networks
> ### Aliases: plot_dynamic_networks
>
> ### ** Examples
>
> data(example_matrix)
> network <- inferCSN(example_matrix)[1:100, ]
ℹ [2025-12-06 14:44:20] Running for <dense matrix>.
◌ [2025-12-06 14:44:20] Checking input parameters...
ℹ [2025-12-06 14:44:20] Using `L0` sparse regression model
ℹ [2025-12-06 14:44:20] Using 1 core
ℹ [2025-12-06 14:44:20] Building results
✔ [2025-12-06 14:44:20] Run done.
> network$celltype <- c(
+ rep("cluster1", 20),
+ rep("cluster2", 20),
+ rep("cluster3", 20),
+ rep("cluster5", 20),
+ rep("cluster6", 20)
+ )
>
> celltypes_order <- c(
+ "cluster5", "cluster3",
+ "cluster2", "cluster1",
+ "cluster6"
+ )
>
> plot_dynamic_networks(
+ network,
+ celltypes_order = celltypes_order
+ )
Warning: Using `size` aesthetic for lines was deprecated in ggplot2 3.4.0.
ℹ Please use `linewidth` instead.
ℹ The deprecated feature was likely used in the inferCSN package.
Please report the issue at <https://github.com/mengxu98/inferCSN/issues>.
>
> plot_dynamic_networks(
+ network,
+ celltypes_order = celltypes_order[1:3]
+ )
>
> plot_dynamic_networks(
+ network,
+ celltypes_order = celltypes_order,
+ plot_type = "ggplotly"
+ )
Error in loadNamespace(x) : there is no package called ‘plotly’
Calls: plot_dynamic_networks ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc