Last updated on 2026-03-04 00:51:29 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.74 | 243.38 | 256.12 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.90 | 210.32 | 222.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 340.25 | 371.25 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 196.00 | 218.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 278.82 | 294.00 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.86 | 254.60 | 270.46 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 351.00 | 362.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 191.00 | 211.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 576.00 | 586.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 254.00 | 278.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/309s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.665, system: 0.060, elapsed: 1.780 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.336, system: 0.119, elapsed: 11.090 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.018, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.821, system: 0.715, elapsed: 27.106 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.177 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.949, system: 0.948, elapsed: 41.166 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.523, system: 0.030, elapsed: 1.841 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.477, system: 0.068, elapsed: 12.603 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.014, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.895, system: 0.751, elapsed: 67.924 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.209 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.885, system: 0.890, elapsed: 83.464 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.503, system: 0.031, elapsed: 2.703 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.052, elapsed: 15.527 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.300, system: 0.016, elapsed: 1.433 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.007, system: 0.833, elapsed: 96.292 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.005, elapsed: 0.245 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.264, system: 0.273, elapsed: 1.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.420, system: 1.240, elapsed: 118.686 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.544, system: 0.037, elapsed: 2.500 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.553, system: 0.099, elapsed: 12.449 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.324, system: 0.027, elapsed: 0.241 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.691, system: 0.702, elapsed: 28.269 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.173 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.376, system: 0.599, elapsed: 14.420 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.499, system: 1.522, elapsed: 59.051 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/495s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.628, system: 0.045, elapsed: 3.938 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.482, system: 0.072, elapsed: 22.011 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.020, elapsed: 1.191 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.900, system: 0.951, elapsed: 181.196 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.004, elapsed: 0.474 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.985, system: 1.115, elapsed: 210.203 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.032, elapsed: 4.724 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.536, system: 0.048, elapsed: 27.681 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.019, elapsed: 1.213 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.793, system: 0.884, elapsed: 160.164 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.004, elapsed: 0.202 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.853, system: 1.010, elapsed: 195.336 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.571, system: 0.036, elapsed: 2.544 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.394, system: 0.118, elapsed: 12.549 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.320, system: 0.032, elapsed: 0.244 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.885, system: 0.909, elapsed: 13.828 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.007, elapsed: 0.233 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.280, system: 0.337, elapsed: 1.133 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.330, system: 1.479, elapsed: 31.438 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.599, system: 0.065, elapsed: 2.594 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.112, elapsed: 11.945 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.015, elapsed: 0.536 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.575, system: 0.666, elapsed: 12.953 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.003, elapsed: 0.181 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.896, system: 0.644, elapsed: 17.946 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.781, system: 1.540, elapsed: 47.006 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64