Last updated on 2025-12-09 23:52:00 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| micvar | 8 | ||
| netgsa | 2 | 2 | 9 |
Current CRAN status: OK: 8
Current CRAN status: ERROR: 2, NOTE: 2, OK: 9
Version: 4.0.6
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘netgsa.Rmd’ using rmarkdown
Quitting from netgsa.Rmd:101-105 [pathways]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `fetchRemote()`:
! cannot download pathway data: are you offline?
---
Backtrace:
▆
1. └─graphite::pathways("hsapiens", "kegg")
2. └─graphite:::loadData(paste(species, database, sep = "-"))
3. └─graphite:::withArchiveDir(...)
4. └─graphite (local) func(path)
5. └─graphite:::fetchRemote(name, path)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'netgsa.Rmd' failed with diagnostics:
cannot download pathway data: are you offline?
--- failed re-building ‘netgsa.Rmd’
SUMMARY: processing the following file failed:
‘netgsa.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 4.0.6
Check: package dependencies
Result: ERROR
Packages required but not available: 'graphite', 'RCy3'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-macos-arm64
Version: 4.0.6
Check: installed package size
Result: NOTE
installed size is 21.2Mb
sub-directories of 1Mb or more:
doc 2.8Mb
libs 17.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64