Last updated on 2026-08-13 17:52:01 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | OK | |||||
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 9.39 | 101.20 | 110.59 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 10.00 | 93.72 | 103.72 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 10.00 | 94.73 | 104.73 | OK | |
| r-devel-windows-x86_64 | 0.1.0 | 18.00 | 160.00 | 178.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.0 | 14.88 | 135.24 | 150.12 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 13.59 | 134.60 | 148.19 | OK | |
| r-release-macos-arm64 | 0.1.0 | 3.00 | 65.00 | 68.00 | OK | |
| r-release-macos-x86_64 | 0.1.0 | 10.00 | 173.00 | 183.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 17.00 | 180.00 | 197.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.0 | 9.00 | 148.00 | 157.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 23.00 | 230.00 | 253.00 | OK |
Version: 0.1.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd' using rmarkdown
Quitting from Comparing_Search_Strategies_with_searchAnalyzeR.Rmd:130-150 [execute_searches]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! HTTP failure: 400
<?xml version="1.0" ?>
<!DOCTYPE PubmedArticleSet PUBLIC "-//NLM//DTD PubMedArticle, 1st January 2025//EN" "https://dtd.nlm.nih.gov/ncbi/pubmed/out/pubmed_250101.dtd">
<PubmedArticleSet> }
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padding-top:0;
padding-left:0;
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background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary.svg");
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background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary-hover.png");
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background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/close.svg");
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.usa-banner .usa-banner-button[aria-expanded=true]{
height:initial;
padding:0;
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.usa-banner .usa-banner-button[aria-expanded=true]::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary.svg");
background-size:100%;
content:'';
display:inline-block;
height:0.7rem;
width:0.7rem;
margin-left:0;
}
.usa-banner .usa-banner-button[aria-expanded=true]:hover::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary-hover.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary-hover.svg");
}
.usa-banner .usa-banner-button[aria-expanded=true]::after{
background-position-y:1px;
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.usa-banner .usa-banner-button[aria-expanded=true]::after{
position:absolute;
right:1.0rem;
top:1.15rem;
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.usa-banner .usa-banner-button[aria-expanded=true]::after{
position:static;
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.usa-banner .usa-banner-button[aria-expanded=true] .usa-banner-button-text{
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marg
---
Backtrace:
▆
1. └─searchAnalyzeR::search_pubmed(...)
2. └─rentrez::entrez_fetch(...)
3. ├─base::do.call(make_entrez_query, args)
4. └─rentrez (local) `<fn>`(...)
5. └─rentrez:::entrez_check(response)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd' failed with diagnostics:
HTTP failure: 400
<?xml version="1.0" ?>
<!DOCTYPE PubmedArticleSet PUBLIC "-//NLM//DTD PubMedArticle, 1st January 2025//EN" "https://dtd.nlm.nih.gov/ncbi/pubmed/out/pubmed_250101.dtd">
<PubmedArticleSet> }
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font-size:1.3rem;
padding-bottom:0;
}
}
.usa-banner .usa-accordion, .usa-banner .usa-accordion-bordered{
margin-top:0;
margin-bottom:0;
list-style-type:none;
padding-left:0;
color:#212121;
margin:0;
padding:0;
width:100%;
}
.usa-banner .usa-banner-header{
padding-top:0.55rem;
padding-bottom:0.55rem;
font-size:0.75rem;
font-weight:400;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-header{
padding-top:0;
padding-bottom:0;
}
}
.usa-banner .usa-banner-inner{
max-width:1040px;
margin-left:auto;
margin-right:auto;
padding-right:1.5rem;
padding-left:1.5rem;
}
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clear:both;
content:"";
display:block;
}
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.usa-banner .usa-banner-inner{
padding-right:3rem;
padding-left:3rem;
}
}
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-ms-flex-align:center;
align-items:center;
border-bottom:1px solid #aeb0b5;
display:-ms-flexbox;
display:flex;
font-size:0.75rem;
min-height:0rem;
padding-right:3rem;
}
@media screen and (min-width: 481px){
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border-bottom:none;
display:block;
font-size:0.75rem;
font-weight:400;
min-height:0;
padding-right:0;
}
}
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margin-left:0;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-header-expanded > .usa-banner-inner{
margin-left:auto;
}
}
.usa-banner .usa-section > :first-child,
.usa-banner .usa-grid > :first-child,
.usa-banner .usa-grid-full > :first-child{
margin-top:0;
}
.usa-banner .usa-section > :last-child,
.usa-banner .usa-grid > :last-child,
.usa-banner .usa-grid-full > :last-child{
margin-bottom:0;
}
.usa-banner img{
border:0;
}
.usa-banner img{
max-width:100%;
}
.usa-banner .usa-banner-header img{
float:left;
margin-right:1rem;
margin-top:1px;
width:1.5rem;
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.usa-banner .usa-banner-header img{
margin-right:0.7rem;
width:1.3rem;
}
}
.usa-banner .usa-banner-header-expanded img{
margin-right:1rem;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-header-expanded img{
margin-right:0.7rem;
}
}
.usa-banner p{
line-height:1.5;
/*margin-bottom:1em;
margin-top:1em;*/
}
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margin-top:0;
margin-bottom:0;
display:inline;
overflow:hidden;
vertical-align:middle;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-header p{
margin-top:2px;
margin-bottom:2px;
display:inline-block;
}
}
.usa-banner .usa-banner-header-expanded p{
line-height:1.3;
vertical-align:top;
font-size: 0.95rem;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-header-expanded p{
line-height:1.5;
vertical-align:middle;
font-size: 0.75rem;
}
}
.usa-banner .usa-accordion-button.usa-banner-button{
background-color:transparent;
border:0;
border-radius:0;
font-weight:400;
margin:0;
padding:0;
text-align:left;
-webkit-font-smoothing:auto;
padding-top:0;
padding-left:4.0rem;
background-position-x:right;
color:#0071bc;
display:block;
font-size:0.7rem;
height:4.3rem;
left:0;
position:absolute;
text-decoration:underline;
top:0;
width:100%;
}
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background-color:transparent;
}
@media screen and (min-width: 481px){
.usa-banner .usa-accordion-button.usa-banner-button{
padding-top:0;
padding-left:0;
display:inline;
height:auto;
margin-left:3px;
position:relative;
vertical-align:middle;
width:auto;
}
}
.usa-banner .usa-accordion-button.usa-banner-button:hover{
color:#205493;
text-decoration:underline;
}
.usa-banner .usa-accordion-button.usa-banner-button[aria-expanded=false]{
background-image:none;
}
.usa-banner .usa-banner-button[aria-expanded=false]::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary.svg");
background-size:100%;
content:'';
display:inline-block;
height:0.7rem;
width:0.7rem;
margin-left:0;
}
.usa-banner .usa-banner-button[aria-expanded=false]:hover::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary-hover.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-down-primary-hover.svg");
}
.usa-banner .usa-banner-button[aria-expanded=false]::after{
background-position-y:1px;
}
.usa-banner .usa-banner-button[aria-expanded=true]{
background-image:none;
height:3.1rem;
}
.usa-banner .usa-banner-button[aria-expanded=true]::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/close.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/close.svg");
background-size:100%;
content:'';
display:inline-block;
height:0.9rem;
width:0.9rem;
margin-left:0;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-button[aria-expanded=true]{
height:initial;
padding:0;
position:relative;
}
.usa-banner .usa-banner-button[aria-expanded=true]::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary.svg");
background-size:100%;
content:'';
display:inline-block;
height:0.7rem;
width:0.7rem;
margin-left:0;
}
.usa-banner .usa-banner-button[aria-expanded=true]:hover::after{
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary-hover.png");
background-image:url("https://www.ncbi.nlm.nih.gov/style-guide/static/django_uswds/uswds/img/angle-arrow-up-primary-hover.svg");
}
.usa-banner .usa-banner-button[aria-expanded=true]::after{
background-position-y:1px;
}
}
.usa-banner .usa-banner-button[aria-expanded=true]::after{
position:absolute;
right:1.0rem;
top:1.15rem;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-button[aria-expanded=true]::after{
position:static;
}
}
.usa-banner .usa-banner-button[aria-expanded=true] .usa-banner-button-text{
display:none;
}
@media screen and (min-width: 481px){
.usa-banner .usa-banner-button[aria-expanded=true] .usa-banner-button-text{
display:inline;
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.usa-banner .usa-accordion-button{
background-color:transparent;
border:0;
border-radius:0;
font-weight:400;
marg
--- failed re-building 'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd'
--- re-building 'Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd' using rmarkdown
--- finished re-building 'Real_PubMed_Search_Analysis_with_searchAnalyzeR.Rmd'
SUMMARY: processing the following file failed:
'Comparing_Search_Strategies_with_searchAnalyzeR.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-windows-x86_64