Last updated on 2026-10-23 12:50:13 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 24.35 | 135.00 | 159.35 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 15.91 | 82.78 | 98.69 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 17.00 | 82.40 | 99.40 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 16.00 | 71.83 | 87.83 | ERROR | |
| r-devel-windows-x86_64 | 1.0.0 | 34.00 | 266.00 | 300.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 23.25 | 97.82 | 121.07 | ERROR | |
| r-release-linux-x86_64 | 1.0.0 | 22.05 | 110.49 | 132.54 | OK | |
| r-release-macos-arm64 | 1.0.0 | 6.00 | 38.00 | 44.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 16.00 | 134.00 | 150.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 29.00 | 185.00 | 214.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | 4.00 | 41.00 | 45.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.0 | 15.00 | 155.00 | 170.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 38.00 | 203.00 | 241.00 | ERROR |
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘srr-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: srr_stats_categories
> ### Title: Get details of current statistical software categories
> ### Aliases: srr_stats_categories
>
> ### ** Examples
>
> srr_stats_categories ()
Error in data.frame(category = cats$category, std_prefix = cats$prefix, :
arguments imply differing number of rows: 10, 9
Calls: srr_stats_categories -> data.frame
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [33s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (srr)
>
> test_check ("srr")
v Downloaded regression standards
v Downloaded ml standards
i Markdown-formatted checklist copied to clipboard
Exports from /home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘OYhFHJgT’ ...
** this is package ‘OYhFHJgT’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o OYhFHJgT.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/OYhFHJgT/src'
installing to /home/hornik/tmp/scratch/RtmpGCJkbl/devtools_install_d6374327f71a2/00LOCK-OYhFHJgT/00new/OYhFHJgT/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (OYhFHJgT)
Exports from /home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘dhvCYigG’ ...
** this is package ‘dhvCYigG’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o dhvCYigG.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/dhvCYigG/src'
installing to /home/hornik/tmp/scratch/RtmpGCJkbl/devtools_install_d637440b4f797/00LOCK-dhvCYigG/00new/dhvCYigG/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (dhvCYigG)
Saving _problems/test-pre-submit-14.R
Saving _problems/test-report-7.R
Saving _problems/test-report-27.R
Exports from /home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘tbiaows’ ...
** this is package ‘tbiaows’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o tbiaows.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
installing to /home/hornik/tmp/scratch/RtmpGCJkbl/devtools_install_d63744b12675c/00LOCK-tbiaows/00new/tbiaows/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (tbiaows)
v Downloaded unsupervised standards
i Roxygen2-formatted standards written to [srr-stats-standards.R]
i Loading tbiaows
i Loading tbiaows
Exports from /home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘tbiaows’ ...
** this is package ‘tbiaows’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o tbiaows.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/tbiaows/src'
installing to /home/hornik/tmp/scratch/RtmpGCJkbl/devtools_install_d637469d2e93c/00LOCK-tbiaows/00new/tbiaows/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (tbiaows)
i Setting Config/roxygen2/version to "8.1.1"
Writing 'NAMESPACE'
i Loading ntxqsda
Exports from /home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/R/RcppExports.R updated.
i Re-compiling ntxqsda (debug build)
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘ntxqsda’ ...
** this is package ‘ntxqsda’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpGGaI9K/RLIBS_cc4522637e944/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o ntxqsda.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpGCJkbl/ntxqsda/src'
installing to /home/hornik/tmp/scratch/RtmpGCJkbl/devtools_install_d637469edf58c/00LOCK-ntxqsda/00new/ntxqsda/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (ntxqsda)
i Loading ntxqsda
i Loading ntxqsda
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-categories.R:3:5'): available categories ───────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─testthat::expect_silent(x <- srr_stats_categories()) at test-categories.R:3:5
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─srr::srr_stats_categories()
10. └─base::data.frame(...)
── Error ('test-pre-submit.R:11:5'): pre-submit ────────────────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─utils::capture.output(rep <- srr_stats_pre_submit(d), type = "message") at test-pre-submit.R:11:5
2. │ └─base::withVisible(...elt(i))
3. └─srr::srr_stats_pre_submit(d)
4. └─srr:::check_missing_standards(stds_in_code, quiet = quiet)
5. └─srr:::get_categories(unique(stds_in_code$stds))
6. └─srr::srr_stats_categories()
7. └─base::data.frame(...)
── Error ('test-report.R:7:5'): srr_report with missing standards ──────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. └─srr::srr_report(path, view = FALSE) at test-report.R:7:5
2. └─srr:::get_stds_txt(msgs)
3. └─srr:::get_categories(s_msgs$stds)
4. └─srr::srr_stats_categories()
5. └─base::data.frame(...)
── Error ('test-report.R:27:5'): srr_report ────────────────────────────────────
Error in `srr_stats_pkg_skeleton()`: The path [/home/hornik/tmp/scratch/RtmpGCJkbl/demo] is not empty; can only make a package in an empty directory
Directory can be cleared with 'unlink(<dir>, recursive = TRUE)'
Backtrace:
▆
1. └─srr::srr_stats_pkg_skeleton() at test-report.R:27:5
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘srr-Ex.R’ failed
The error most likely occurred in:
> ### Name: srr_stats_categories
> ### Title: Get details of current statistical software categories
> ### Aliases: srr_stats_categories
>
> ### ** Examples
>
> srr_stats_categories ()
Error in data.frame(category = cats$category, std_prefix = cats$prefix, :
arguments imply differing number of rows: 10, 9
Calls: srr_stats_categories -> data.frame
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-oldrel-windows-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [40s/63s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (srr)
>
> test_check ("srr")
v Downloaded regression standards
v Downloaded ml standards
i Markdown-formatted checklist copied to clipboard
Exports from /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src/cpptest.cpp:
int test()
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src/RcppExports.cpp updated.
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘kHpLImzb’ ...
** this is package ‘kHpLImzb’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.4’
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from cpptest.cpp:1:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o kHpLImzb.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src'
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src'
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/kHpLImzb/src'
installing to /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/devtools_install_34518e7128dcc8/00LOCK-kHpLImzb/00new/kHpLImzb/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (kHpLImzb)
Exports from /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src/cpptest.cpp:
int test()
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src/RcppExports.cpp updated.
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘budQqIFL’ ...
** this is package ‘budQqIFL’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.4’
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from cpptest.cpp:1:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o budQqIFL.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src'
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src'
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/budQqIFL/src'
installing to /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/devtools_install_34518e64490591/00LOCK-budQqIFL/00new/budQqIFL/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (budQqIFL)
Saving _problems/test-pre-submit-14.R
Saving _problems/test-report-7.R
Saving _problems/test-report-27.R
Exports from /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src/cpptest.cpp:
int test()
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src/RcppExports.cpp updated.
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘drpmecz’ ...
** this is package ‘drpmecz’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.4’
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from cpptest.cpp:1:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o drpmecz.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
installing to /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/devtools_install_34518e87d36ca/00LOCK-drpmecz/00new/drpmecz/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (drpmecz)
v Downloaded unsupervised standards
i Roxygen2-formatted standards written to [srr-stats-standards.R]
i Loading drpmecz
i Loading drpmecz
Exports from /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src/cpptest.cpp:
int test()
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src/RcppExports.cpp updated.
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘drpmecz’ ...
** this is package ‘drpmecz’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.4’
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from cpptest.cpp:1:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o drpmecz.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/drpmecz/src'
installing to /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/devtools_install_34518e3ea67bfb/00LOCK-drpmecz/00new/drpmecz/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (drpmecz)
i Setting Config/roxygen2/version to "8.1.1"
Writing 'NAMESPACE'
i Loading jqrnasd
Exports from /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src/cpptest.cpp:
int test()
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src/RcppExports.cpp updated.
/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/R/RcppExports.R updated.
i Re-compiling jqrnasd (debug build)
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘jqrnasd’ ...
** this is package ‘jqrnasd’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘clang version 23.1.4’
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src'
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
In file included from RcppExports.cpp:4:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -I"/data/localhost/ripley/R/R-clang/include" -DNDEBUG -I'/tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include' -isystem /usr/local/clang23/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -Wno-missing-template-arg-list-after-template-kw -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from cpptest.cpp:1:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp.h:27:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/RcppCommon.h:30:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/r/headers.h:67:
In file included from /tmp/Rtmp56VdrY/RLIBS_3438f45045bc7/Rcpp/include/Rcpp/platform/compiler.h:37:
In file included from /usr/local/clang23/bin/../include/c++/v1/cmath:318:
In file included from /usr/local/clang23/bin/../include/c++/v1/__config:21:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/abi.h:15:
In file included from /usr/local/clang23/bin/../include/c++/v1/__configuration/platform.h:39:
/usr/include/features.h:451:4: warning: _FORTIFY_SOURCE requires compiling with optimization (-O) [-W#warnings]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^
1 warning generated.
/usr/local/clang23/bin/clang++ -std=gnu++20 -shared -L/usr/local/clang/lib64 -L/usr/local/clang23/lib -L/usr/local/clang23/lib/x86_64-unknown-linux-gnu -L/usr/local/lib64 -o jqrnasd.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src'
make[1]: Entering directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src'
make[1]: Leaving directory '/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/jqrnasd/src'
installing to /tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/devtools_install_34518e4ec77f25/00LOCK-jqrnasd/00new/jqrnasd/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (jqrnasd)
i Loading jqrnasd
i Loading jqrnasd
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-categories.R:3:5'): available categories ───────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─testthat::expect_silent(x <- srr_stats_categories()) at test-categories.R:3:5
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─srr::srr_stats_categories()
10. └─base::data.frame(...)
── Error ('test-pre-submit.R:11:5'): pre-submit ────────────────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─utils::capture.output(rep <- srr_stats_pre_submit(d), type = "message") at test-pre-submit.R:11:5
2. │ └─base::withVisible(...elt(i))
3. └─srr::srr_stats_pre_submit(d)
4. └─srr:::check_missing_standards(stds_in_code, quiet = quiet)
5. └─srr:::get_categories(unique(stds_in_code$stds))
6. └─srr::srr_stats_categories()
7. └─base::data.frame(...)
── Error ('test-report.R:7:5'): srr_report with missing standards ──────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. └─srr::srr_report(path, view = FALSE) at test-report.R:7:5
2. └─srr:::get_stds_txt(msgs)
3. └─srr:::get_categories(s_msgs$stds)
4. └─srr::srr_stats_categories()
5. └─base::data.frame(...)
── Error ('test-report.R:27:5'): srr_report ────────────────────────────────────
Error in `srr_stats_pkg_skeleton()`: The path [/tmp/Rtmp56VdrY/working_dir/RtmppQf6d8/demo] is not empty; can only make a package in an empty directory
Directory can be cleared with 'unlink(<dir>, recursive = TRUE)'
Backtrace:
▆
1. └─srr::srr_stats_pkg_skeleton() at test-report.R:27:5
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [30s/29s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (srr)
>
> test_check ("srr")
v Downloaded regression standards
v Downloaded ml standards
i Markdown-formatted checklist copied to clipboard
Exports from /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src/cpptest.cpp:
int test()
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src/RcppExports.cpp updated.
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘miSBCdvZ’ ...
** this is package ‘miSBCdvZ’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from cpptest.cpp:1:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o miSBCdvZ.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src'
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src'
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/miSBCdvZ/src'
installing to /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/devtools_install_39929c28b650c9/00LOCK-miSBCdvZ/00new/miSBCdvZ/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (miSBCdvZ)
Exports from /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src/cpptest.cpp:
int test()
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src/RcppExports.cpp updated.
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘CriFNuSL’ ...
** this is package ‘CriFNuSL’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from cpptest.cpp:1:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o CriFNuSL.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src'
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src'
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/CriFNuSL/src'
installing to /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/devtools_install_39929c584329b/00LOCK-CriFNuSL/00new/CriFNuSL/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (CriFNuSL)
Saving _problems/test-pre-submit-14.R
Saving _problems/test-report-7.R
Saving _problems/test-report-27.R
Exports from /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src/cpptest.cpp:
int test()
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src/RcppExports.cpp updated.
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘bofvqkc’ ...
** this is package ‘bofvqkc’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from cpptest.cpp:1:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o bofvqkc.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
installing to /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/devtools_install_39929c36f0acaf/00LOCK-bofvqkc/00new/bofvqkc/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (bofvqkc)
v Downloaded unsupervised standards
i Roxygen2-formatted standards written to [srr-stats-standards.R]
i Loading bofvqkc
i Loading bofvqkc
Exports from /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src/cpptest.cpp:
int test()
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src/RcppExports.cpp updated.
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘bofvqkc’ ...
** this is package ‘bofvqkc’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from cpptest.cpp:1:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o bofvqkc.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/bofvqkc/src'
installing to /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/devtools_install_39929c725b3c8a/00LOCK-bofvqkc/00new/bofvqkc/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (bofvqkc)
i Setting Config/roxygen2/version to "8.1.1"
Writing 'NAMESPACE'
i Loading pngktym
Exports from /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src/cpptest.cpp:
int test()
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src/RcppExports.cpp updated.
/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/R/RcppExports.R updated.
i Re-compiling pngktym (debug build)
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘pngktym’ ...
** this is package ‘pngktym’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2)’
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src'
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/data/localhost/ripley/R/R-devel/include" -DNDEBUG -I'/data/localhost/ripley/R/test-dev/Rcpp/include' -I/usr/local/include -fpic -g -O2 -Wall -pedantic -mtune=native -Wno-ignored-attributes -Wno-parentheses -Wp,-D_FORTIFY_SOURCE=3 -fexceptions -fstack-protector-strong -fstack-clash-protection -fcf-protection -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from RcppExports.cpp:4:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39,
from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677,
from /usr/include/c++/16/bits/requires_hosted.h:31,
from /usr/include/c++/16/cmath:46,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/platform/compiler.h:37,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp/r/headers.h:67,
from /data/localhost/ripley/R/test-dev/Rcpp/include/RcppCommon.h:30,
from /data/localhost/ripley/R/test-dev/Rcpp/include/Rcpp.h:27,
from cpptest.cpp:1:
/usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp]
451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O)
| ^~~~~~~
g++ -std=gnu++20 -shared -L/usr/local/lib64 -o pngktym.so RcppExports.o cpptest.o
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src'
make[1]: Entering directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src'
make[1]: Leaving directory '/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/pngktym/src'
installing to /tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/devtools_install_39929c1020e38c/00LOCK-pngktym/00new/pngktym/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (pngktym)
i Loading pngktym
i Loading pngktym
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-categories.R:3:5'): available categories ───────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─testthat::expect_silent(x <- srr_stats_categories()) at test-categories.R:3:5
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─srr::srr_stats_categories()
10. └─base::data.frame(...)
── Error ('test-pre-submit.R:11:5'): pre-submit ────────────────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─utils::capture.output(rep <- srr_stats_pre_submit(d), type = "message") at test-pre-submit.R:11:5
2. │ └─base::withVisible(...elt(i))
3. └─srr::srr_stats_pre_submit(d)
4. └─srr:::check_missing_standards(stds_in_code, quiet = quiet)
5. └─srr:::get_categories(unique(stds_in_code$stds))
6. └─srr::srr_stats_categories()
7. └─base::data.frame(...)
── Error ('test-report.R:7:5'): srr_report with missing standards ──────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. └─srr::srr_report(path, view = FALSE) at test-report.R:7:5
2. └─srr:::get_stds_txt(msgs)
3. └─srr:::get_categories(s_msgs$stds)
4. └─srr::srr_stats_categories()
5. └─base::data.frame(...)
── Error ('test-report.R:27:5'): srr_report ────────────────────────────────────
Error in `srr_stats_pkg_skeleton()`: The path [/tmp/RtmpLxVJv8/working_dir/RtmpKmWOdB/demo] is not empty; can only make a package in an empty directory
Directory can be cleared with 'unlink(<dir>, recursive = TRUE)'
Backtrace:
▆
1. └─srr::srr_stats_pkg_skeleton() at test-report.R:27:5
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [45s/55s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (srr)
>
> test_check ("srr")
v Downloaded regression standards
v Downloaded ml standards
i Markdown-formatted checklist copied to clipboard
Exports from /home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘wLAPJYco’ ...
** this is package ‘wLAPJYco’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o wLAPJYco.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/wLAPJYco/src'
installing to /home/hornik/tmp/scratch/Rtmp2zLrNM/devtools_install_a44b52541f90e/00LOCK-wLAPJYco/00new/wLAPJYco/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (wLAPJYco)
Exports from /home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘aJCZwhzj’ ...
** this is package ‘aJCZwhzj’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o aJCZwhzj.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/aJCZwhzj/src'
installing to /home/hornik/tmp/scratch/Rtmp2zLrNM/devtools_install_a44b52ce5c4b3/00LOCK-aJCZwhzj/00new/aJCZwhzj/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (aJCZwhzj)
Saving _problems/test-pre-submit-14.R
Saving _problems/test-report-7.R
Saving _problems/test-report-27.R
Exports from /home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘kzyuljm’ ...
** this is package ‘kzyuljm’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o kzyuljm.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
installing to /home/hornik/tmp/scratch/Rtmp2zLrNM/devtools_install_a44b56152486f/00LOCK-kzyuljm/00new/kzyuljm/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (kzyuljm)
v Downloaded unsupervised standards
i Roxygen2-formatted standards written to [srr-stats-standards.R]
i Loading kzyuljm
i Loading kzyuljm
Exports from /home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘kzyuljm’ ...
** this is package ‘kzyuljm’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o kzyuljm.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/kzyuljm/src'
installing to /home/hornik/tmp/scratch/Rtmp2zLrNM/devtools_install_a44b510c57847/00LOCK-kzyuljm/00new/kzyuljm/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (kzyuljm)
i Setting Config/roxygen2/version to "8.1.1"
Writing 'NAMESPACE'
i Loading zlryafo
Exports from /home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src/cpptest.cpp:
int test()
/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src/RcppExports.cpp updated.
/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/R/RcppExports.R updated.
i Re-compiling zlryafo (debug build)
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package ‘zlryafo’ ...
** this is package ‘zlryafo’ version ‘0.0.0.9000’
** using staged installation
** libs
using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src'
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++-16 -std=gnu++20 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpK2464C/RLIBS_a08975cfe995c/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o zlryafo.so RcppExports.o cpptest.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2zLrNM/zlryafo/src'
installing to /home/hornik/tmp/scratch/Rtmp2zLrNM/devtools_install_a44b5745aa5a1/00LOCK-zlryafo/00new/zlryafo/libs
** checking absolute paths in shared objects and dynamic libraries
* DONE (zlryafo)
i Loading zlryafo
i Loading zlryafo
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-categories.R:3:5'): available categories ───────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─testthat::expect_silent(x <- srr_stats_categories()) at test-categories.R:3:5
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─srr::srr_stats_categories()
10. └─base::data.frame(...)
── Error ('test-pre-submit.R:11:5'): pre-submit ────────────────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─utils::capture.output(rep <- srr_stats_pre_submit(d), type = "message") at test-pre-submit.R:11:5
2. │ └─base::withVisible(...elt(i))
3. └─srr::srr_stats_pre_submit(d)
4. └─srr:::check_missing_standards(stds_in_code, quiet = quiet)
5. └─srr:::get_categories(unique(stds_in_code$stds))
6. └─srr::srr_stats_categories()
7. └─base::data.frame(...)
── Error ('test-report.R:7:5'): srr_report with missing standards ──────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. └─srr::srr_report(path, view = FALSE) at test-report.R:7:5
2. └─srr:::get_stds_txt(msgs)
3. └─srr:::get_categories(s_msgs$stds)
4. └─srr::srr_stats_categories()
5. └─base::data.frame(...)
── Error ('test-report.R:27:5'): srr_report ────────────────────────────────────
Error in `srr_stats_pkg_skeleton()`: The path [/home/hornik/tmp/scratch/Rtmp2zLrNM/demo] is not empty; can only make a package in an empty directory
Directory can be cleared with 'unlink(<dir>, recursive = TRUE)'
Backtrace:
▆
1. └─srr::srr_stats_pkg_skeleton() at test-report.R:27:5
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 79 ]
Error:
! Test failures.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.0
Check: tests
Result: ERROR
Running 'testthat.R' [89s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library (testthat)
> library (srr)
>
> test_check ("srr")
v Downloaded regression standards
v Downloaded ml standards
i Markdown-formatted checklist copied to clipboard
Exports from D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src/cpptest.cpp:
int test()
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src/RcppExports.cpp updated.
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package 'ETtNskWC' ...
** this is package 'ETtNskWC' version '0.0.0.9000'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++ -std=gnu++17 -shared -static-libgcc -o ETtNskWC.dll tmp.def RcppExports.o cpptest.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src'
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/ETtNskWC/src'
installing to D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/devtools_install_75c9857231e8c/00LOCK-ETtNskWC/00new/ETtNskWC/libs/x64
* DONE (ETtNskWC)
Exports from D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src/cpptest.cpp:
int test()
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src/RcppExports.cpp updated.
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package 'hRUuJtPe' ...
** this is package 'hRUuJtPe' version '0.0.0.9000'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++ -std=gnu++17 -shared -static-libgcc -o hRUuJtPe.dll tmp.def RcppExports.o cpptest.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src'
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/hRUuJtPe/src'
installing to D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/devtools_install_75c9834d17426/00LOCK-hRUuJtPe/00new/hRUuJtPe/libs/x64
* DONE (hRUuJtPe)
Saving _problems/test-pre-submit-14.R
Saving _problems/test-report-7.R
Saving _problems/test-report-27.R
Exports from D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src/cpptest.cpp:
int test()
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src/RcppExports.cpp updated.
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package 'obcgphz' ...
** this is package 'obcgphz' version '0.0.0.9000'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++ -std=gnu++17 -shared -static-libgcc -o obcgphz.dll tmp.def RcppExports.o cpptest.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
installing to D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/devtools_install_75c986ecf3701/00LOCK-obcgphz/00new/obcgphz/libs/x64
* DONE (obcgphz)
v Downloaded unsupervised standards
i Roxygen2-formatted standards written to [srr-stats-standards.R]
i Loading obcgphz
i Loading obcgphz
Exports from D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src/cpptest.cpp:
int test()
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src/RcppExports.cpp updated.
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/R/RcppExports.R updated.
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package 'obcgphz' ...
** this is package 'obcgphz' version '0.0.0.9000'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++ -std=gnu++17 -shared -static-libgcc -o obcgphz.dll tmp.def RcppExports.o cpptest.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/obcgphz/src'
installing to D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/devtools_install_75c983ea79af/00LOCK-obcgphz/00new/obcgphz/libs/x64
* DONE (obcgphz)
i Setting Config/roxygen2/version to "8.1.1"
Writing 'NAMESPACE'
i Loading xeujnfi
Exports from D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src/cpptest.cpp:
int test()
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src/RcppExports.cpp updated.
D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/R/RcppExports.R updated.
i Re-compiling xeujnfi (debug build)
-- R CMD INSTALL ---------------------------------------------------------------
* installing *source* package 'xeujnfi' ...
** this is package 'xeujnfi' version '0.0.0.9000'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.3.0'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src'
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"D:/RCompile/recent/R-4.5.3/include" -DNDEBUG -I'D:/temp/2026_10_21_01_50_00_6553/RtmpgJVFAf/RLIBS_5ce44656f5543/Rcpp/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -gdwarf-2 -mfpmath=sse -msse2 -mstackrealign -UNDEBUG -Wall -pedantic -g -O0 -c cpptest.cpp -o cpptest.o
g++ -std=gnu++17 -shared -static-libgcc -o xeujnfi.dll tmp.def RcppExports.o cpptest.o -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R-4.5.3/bin/x64 -lR
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src'
make[1]: Entering directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src'
make[1]: Leaving directory '/d/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/xeujnfi/src'
installing to D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/devtools_install_75c985124b80/00LOCK-xeujnfi/00new/xeujnfi/libs/x64
* DONE (xeujnfi)
i Loading xeujnfi
i Loading xeujnfi
[ FAIL 4 | WARN 0 | SKIP 1 | PASS 78 ]
══ Skipped tests (1) ═══════════════════════════════════════════════════════════
• empty test (1): 'test-pkg-skeleton.R:101:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-categories.R:3:5'): available categories ───────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─testthat::expect_silent(x <- srr_stats_categories()) at test-categories.R:3:5
2. │ └─testthat:::quasi_capture(enquo(object), NULL, evaluate_promise)
3. │ ├─testthat (local) .capture(...)
4. │ │ ├─withr::with_output_sink(...)
5. │ │ │ └─base::force(code)
6. │ │ ├─base::withCallingHandlers(...)
7. │ │ └─base::withVisible(code)
8. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
9. └─srr::srr_stats_categories()
10. └─base::data.frame(...)
── Error ('test-pre-submit.R:11:5'): pre-submit ────────────────────────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. ├─utils::capture.output(rep <- srr_stats_pre_submit(d), type = "message") at test-pre-submit.R:11:5
2. │ └─base::withVisible(...elt(i))
3. └─srr::srr_stats_pre_submit(d)
4. └─srr:::check_missing_standards(stds_in_code, quiet = quiet)
5. └─srr:::get_categories(unique(stds_in_code$stds))
6. └─srr::srr_stats_categories()
7. └─base::data.frame(...)
── Error ('test-report.R:7:5'): srr_report with missing standards ──────────────
Error in `data.frame(category = cats$category, std_prefix = cats$prefix, title = cat_full[index - 1], url = cat_full[index])`: arguments imply differing number of rows: 10, 9
Backtrace:
▆
1. └─srr::srr_report(path, view = FALSE) at test-report.R:7:5
2. └─srr:::get_stds_txt(msgs)
3. └─srr:::get_categories(s_msgs$stds)
4. └─srr::srr_stats_categories()
5. └─base::data.frame(...)
── Error ('test-report.R:27:5'): srr_report ────────────────────────────────────
Error in `srr_stats_pkg_skeleton()`: The path [D:/temp/2026_10_21_01_50_00_6553/RtmpQdhvUJ/demo] is not empty; can only make a package in an empty directory
Directory can be cleared with 'unlink(<dir>, recursive = TRUE)'
Backtrace:
▆
1. └─srr::srr_stats_pkg_skeleton() at test-report.R:27:5
[ FAIL 4 | WARN 0 | SKIP 1 | PASS 78 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-windows-x86_64