CRAN Package Check Results for Package survML

Last updated on 2026-10-22 23:56:59 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	1.2.0	6.33	376.21	382.54	OK
r-devel-linux-x86_64-debian-gcc	1.2.0	4.89	247.68	252.57	OK
r-devel-linux-x86_64-fedora-clang	1.2.0			218.17	ERROR
r-devel-linux-x86_64-fedora-gcc	1.2.0			224.18	ERROR
r-devel-windows-x86_64	1.2.0	11.00	380.00	391.00	OK
r-patched-linux-x86_64	1.2.0	6.05	366.84	372.89	OK
r-release-linux-x86_64	1.2.0	6.27	362.30	368.57	OK
r-release-macos-arm64	1.2.0	1.00	83.00	84.00	OK
r-release-macos-x86_64	1.2.0	4.00	381.00	385.00	OK
r-release-windows-x86_64	1.2.0	12.00	367.00	379.00	OK
r-oldrel-macos-arm64	1.2.0				OK
r-oldrel-macos-x86_64	1.2.0	4.00	354.00	358.00	OK
r-oldrel-windows-x86_64	1.2.0	13.00	525.00	538.00	OK

Check Details

Version: 1.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [59s/84s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(survML) Loading required package: SuperLearner Loading required package: gam Loading required package: splines Loading required package: foreach Loaded gam 1.22-7 Loading required package: nnls Super Learner Version: 2.0-42 Package created on 2026-09-14 > > test_check("survML") Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Saving _problems/test-test-stackL-33.R [ FAIL 1 | WARN 7 | SKIP 0 | PASS 208 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test-stackL.R:23:1'): (code run outside of `test_that()`) ────── Error in `UseMethod("predict")`: no applicable method for 'predict' applied to an object of class "NULL" Backtrace: ▆ 1. └─survML::stackL(...) at test-test-stackL.R:23:1 2. └─base::apply(...) 3. └─survML (local) FUN(newX[, i], ...) 4. ├─stats::predict(fit, newdata = new_stacked) 5. └─SuperLearner::predict.SuperLearner(fit, newdata = new_stacked) 6. ├─base::do.call(...) 7. └─stats::predict(...) [ FAIL 1 | WARN 7 | SKIP 0 | PASS 208 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.2.0
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘conditional_survival.Rmd’ using rmarkdown Quitting from conditional_survival.Rmd:49-86 [stackG_example] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `UseMethod()`: ! no applicable method for 'predict' applied to an object of class "NULL" --- Backtrace: ▆ 1. └─survML::stackG(...) 2. ├─stats::predict(P_Delta_opt, newX = newX) 3. └─survML:::predict.p_delta_SuperLearner(P_Delta_opt, newX = newX) 4. ├─stats::predict(fit$reg.object, newdata = newX) 5. └─SuperLearner::predict.SuperLearner(fit$reg.object, newdata = newX) 6. ├─base::do.call(...) 7. └─stats::predict(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'conditional_survival.Rmd' failed with diagnostics: no applicable method for 'predict' applied to an object of class "NULL" --- failed re-building ‘conditional_survival.Rmd’ --- re-building ‘current_status.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘current_status.Rmd’ --- re-building ‘variable_importance.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘variable_importance.Rmd’ SUMMARY: processing the following file failed: ‘conditional_survival.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.2.0
Check: tests
Result: ERROR Running ‘testthat.R’ [59s/101s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(survML) Loading required package: SuperLearner Loading required package: gam Loading required package: splines Loading required package: foreach Loaded gam 1.22-7 Loading required package: nnls Super Learner Version: 2.0-42 Package created on 2026-09-14 > > test_check("survML") Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Error in a$specials[[i]] : subscript out of bounds Saving _problems/test-test-stackL-33.R [ FAIL 1 | WARN 7 | SKIP 0 | PASS 208 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-test-stackL.R:23:1'): (code run outside of `test_that()`) ────── Error in `UseMethod("predict")`: no applicable method for 'predict' applied to an object of class "NULL" Backtrace: ▆ 1. └─survML::stackL(...) at test-test-stackL.R:23:1 2. └─base::apply(...) 3. └─survML (local) FUN(newX[, i], ...) 4. ├─stats::predict(fit, newdata = new_stacked) 5. └─SuperLearner::predict.SuperLearner(fit, newdata = new_stacked) 6. ├─base::do.call(...) 7. └─stats::predict(...) [ FAIL 1 | WARN 7 | SKIP 0 | PASS 208 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc