Produce maximum likelihood estimates of common accuracy statistics
 for multiple measurement methods when a gold standard is not available. An R 
 implementation of the expectation maximization algorithms described in Zhou et 
 al. (2011) <doi:10.1002/9780470906514> with additional functions for creating 
 simulated data and visualizing results. Supports binary, ordinal, and 
 continuous measurement methods.

Analyzes and quantifies ecosystem multifunctionality with functions to calculate multifunctionality richness (MFric), multifunctionality divergence (MFdiv), and multifunctionality regularity (MFreg). These indices help assess the relationship between biodiversity and multiple ecosystem functions. For more details, see Byrnes et al. (2014) <doi:10.1111/2041-210X.12143> and Chao et al. (2024) <doi:10.1111/ele.14336>.

Provides basic distribution functions for a mixture model of a Gaussian and exponential distribution.

Initially designed to distribute code for estimating the Gaussian
  graphical model with Lasso regularization, also known as the graphical lasso
  (glasso), using an Expectation-Maximization (EM) algorithm based on work by
  Städler and Bühlmann (2012) <doi:10.1007/s11222-010-9219-7>. As a byproduct,
  code for estimating means and covariances (or the precision matrix) under a
  multivariate normal (Gaussian) distribution is also available.

Tools to fit Mixture Cure Rate models via the Expectation-Maximization (EM) algorithm, allowing for flexible link functions in the cure component and various survival distributions in the latency part. The package supports user-specified link functions, includes methods for parameter estimation and model diagnostics, and provides residual analysis tailored for cure models. The classical theory methods used are described in Berkson, J. and Gage, R. P. (1952) <doi:10.2307/2281318>, Dempster, A. P., Laird, N. M. and Rubin, D. B. (1977) <https://www.jstor.org/stable/2984875>, Bazán, J., Torres-Avilés, F., Suzuki, A. and Louzada, F. (2017)<doi:10.1002/asmb.2215>.