A comprehensive reproducibility framework designed for R and bioinformatics
    workflows. Automatically captures the entire analysis environment including R session
    info, package versions, external tool versions ('Samtools', 'STAR', 'BWA', etc.), 'conda'
    environments, reference genomes, data provenance with smart checksumming for large files,
    parameter choices, random seeds, and hardware specifications. Generates executable scripts
    with 'Docker', 'Singularity', and 'renv' configurations. Integrates with workflow managers
    ('Nextflow', 'Snakemake', 'WDL', 'CWL') to ensure complete reproducibility of computational
    research workflows.

Git hook scripts are useful for identifying simple issues before submission to code review. 'captain' (hook) is an R package to manage and run git pre-commit hooks.

Get text from images of text using Captricity Optical Character
    Recognition (OCR) API. Captricity allows you to get text from handwritten
    forms --- think surveys --- and other structured paper documents. And it can
    output data in form a delimited file keeping field information intact. For more
    information, read <https://shreddr.captricity.com/developer/overview/>.

Calibration of penalized criteria for model selection. The calibration methods available in this package are based on the slope heuristics.

Fast and user-friendly estimation of generalized linear models with
    multiple fixed effects and cluster the standard errors. The method to obtain
    the estimated fixed-effects coefficients is based on Stammann (2018) 
    <doi:10.48550/arXiv.1707.01815>, Gaure (2013)
    <doi:10.1016/j.csda.2013.03.024>, Berge (2018)
    <https://ideas.repec.org/p/luc/wpaper/18-13.html>, and Correia et al. (2020)
    <doi: 10.1177/1536867X20909691>.

Functions to Accompany J. Fox and S. Weisberg, 
  An R Companion to Applied Regression, Third Edition, Sage, 2019.

Computer algebra via the 'SymPy' library (<https://www.sympy.org/>). 
  This makes it possible to solve equations symbolically, 
  find symbolic integrals, symbolic sums and other important quantities.