Suggests: knitr, rmarkdown, testthat, vdiffr, spelling, fontquiver,
showtext, sysfonts

Depends: R (>= 4.1.0)
Imports: data.table, future, future.apply, cli (>= 3.6.1)
Suggests: testthat (>= 3.0.0), tidyr (>= 1.3.0), comorbidity (>=
1.0.7), knitr, rmarkdown

Suggests: checkmate, pkgload, plotrix, rmarkdown, rprojroot, RUnit,
testthat, tinytest

Suggests: testthat (>= 3.0.0), knitr, rmarkdown, waldo

Depends: R (>= 4.0)
Imports: ape (>= 5.6), cli (>= 3.0), cluster, fastmap, fastmatch (>=
1.1.3), fs, future, PlotTools, promises, protoclust, Rcpp,
Rdpack (>= 0.7), Rogue (> 2.0.0), shiny (>= 1.6.0), shinyjs,
stats, stringi, TreeDist (>= 2.6.3), TreeTools (>= 1.16),
LinkingTo: Rcpp, TreeTools,
Suggests: knitr, phangorn (>= 2.2.1), Quartet, readxl, rmarkdown,
shinytest, spelling, testthat, vdiffr (>= 1.0.0),

Suggests: gbm, jsonlite, lightgbm, randomForest, ranger, scales,
survival, testthat, xgboost

Suggests: testthat (>= 3.0.0), treesitter.r (>= 1.1.0)

Suggests: testthat (>= 3.0.0), treesitter

Suggests: devtools, ggpubr (>= 0.6.0), knitr, rmarkdown, testthat (>=
3.0.0)

Depends: R (>= 3.4.0), ape, ade4
Imports: adegenet, adegraphics, combinat, compiler, distory, fields,
htmlwidgets, MASS, methods, parallel, phangorn, phytools, Rcpp,
rgl, RLumShiny, scatterD3, shiny, shinyBS, utils
LinkingTo: Rcpp
Suggests: ggplot2, igraph, knitr, pander, RColorBrewer, reshape2,
rmarkdown, sf, testthat

Suggests: phytools, phyloTop, testthat, geiger, nLTT, castor, adephylo,
ggplot2, tibble, picante, RPANDA, lintr, rmarkdown, knitr,
igraph, RSpectra, Matrix, pheatmap

Suggests: ggtree, ggplot2, knitr, rmarkdown, getopt, bookdown,
phangorn, treeio

Depends: R (>= 3.6.0), ape (>= 5.6),
Imports: bit64, fastmatch (>= 1.1.3), methods, PlotTools, RCurl, Rdpack
(>= 2.3), stringi,
LinkingTo: Rcpp
Suggests: spelling, knitr, phangorn (>= 2.2.1), Rcpp (>= 1.0.8),
rmarkdown, testthat (>= 3.0), TreeDist, TreeSearch, vdiffr (>=
1.0.0),

Depends: R (>= 3.4.0)
Imports: dplyr, purrr, grid, htmltools, DistributionUtils, grDevices,
gtable, digest, jsonlite, ggplot2 (>= 3.2.1), base64enc,
htmlwidgets, graphics, progress, utils, knitr, webshot,
autocogs, tidyr, rlang, fidelius
Suggests: plotly, testthat, covr, gapminder, rmarkdown, shiny,
housingData