Suggests: covr, lpjmlkit, knitr, ncdf4, pkgconfig, quitte, raster,
rmarkdown, terra, testthat (>= 3.1.5), tibble, withr

Depends: R (>= 3.2.0)
Imports: Rcpp, Matrix, parallel, MASS, foreach, GMMAT, CompQuadForm,
data.table
LinkingTo: Rcpp, RcppArmadillo
Suggests: doMC, SeqArray, SeqVarTools, testthat

Depends: R (>= 3.6.0)
Imports: Rcpp (>= 1.0.6), gridExtra, gridBase, grid, methods, deSolve
LinkingTo: Rcpp, RcppArmadillo, BH, roptim
Suggests: testthat, mvtnorm, covr, knitr, MASS, rmarkdown, markdown

Imports: grDevices, graphics, stats, celestial (>= 1.4.1), MASS,
plotrix, sm, mapproj, RANN
Suggests: imager, fst

Depends: R (>= 4.1.0)
Imports: Rcpp (>= 0.12.12), magrittr, curl
LinkingTo: Rcpp
Suggests: av, spelling, jsonlite, methods, knitr, rmarkdown, rsvg,
webp, pdftools, ggplot2, gapminder, IRdisplay, tesseract,
gifski

Depends: R (>= 2.10)
Imports: broom, dplyr, ggplot2, magrittr, methods, mvtnorm, plyr,
purrr, Rcpp, rlang, stats, tibble, tidyr, tidyselect
LinkingTo: Rcpp
Suggests: gganimate, gifski, gridExtra, knitr, plotly, png, rmarkdown,
testthat (>= 3.0.0), transformr

Suggests: dittoSeq, BiocStyle, vcr, webmockr, testthat, knitr,
rmarkdown

Imports: ape, coxme, doParallel, dplyr, foreach, iterators, lme4,
multcomp, parallel, plyr, qqman, survival, seqinr

Depends: R (>= 3.4.0)
Suggests: covr, knitr, rlang, rmarkdown, testthat

Imports: tcltk, grDevices, utils, Biobase
Suggests: tkrplot, gWidgets2, Rgraphviz, ssize, Biostrings,
BiocManager, RSQLite, GEOquery, GEOmetadb, RBGL, WGCNA,
KEGGREST, KEGGgraph, pdInfoBuilder, lumi, oligo, graph, affy,
genefilter, beadarray, GOstats, GO.db, Category, annotate,
impute, limma, graphics, methods, stats

Depends: R (>= 3.5.0)
Imports: data.table, tidyr, ggplot2, lpSolve, quadprog
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Depends: R (>= 4.1)
Imports: graphics, grDevices, stats, survival, lubridate, matrixStats,
MASS, boot, stringr, lmtest, sandwich
Suggests: knitr, testthat (>= 2.0), ggplot2, rmarkdown, dplyr,
survminer, flexsurv, tibble, vdiffr, checkmate