Imports: Rcpp, geigen, shapes, expm, mvtnorm, stats, Matrix,
doParallel, foreach, parallel, pracma, Rdpack, utils, SHT

Suggests: testthat, covr (>= 3.5.2), withr, R6, cli, dplyr, igraph,
knitr, rmarkdown

Imports: ggplot2, rgl, grDevices, misc3d

Suggests: testthat, knitr, readxl, rmarkdown, plotly, gt, dplyr,
ggplot2, tidyr, withr

Depends: R (>= 3.5.0)
Imports: ggplot2 (>= 3.5.2), grid, gtable, grDevices, methods, rlang,
scales
Suggests: Cairo, covr, dplyr, forcats, gridGraphics (>= 0.4-0), knitr,
lattice, magick, maps, PASWR, patchwork, rmarkdown, ragg,
testthat (>= 1.0.0), tidyr, vdiffr (>= 0.3.0), VennDiagram

Imports: crayon, rlang
Suggests: fortunes, rmsfact, knitr, rmarkdown, testthat

Imports: survival, randomForestSRC, polspline, tidyr, ranger, pracma,
gbm

Depends: survival (>= 2.36.14), methods, bdsmatrix(>= 1.3), R(>= 2.10)

Imports: Matrix, survival, irlba, stats, utils, gdsfmt, BEDMatrix

Depends: R (>= 4.1.0),
Imports: caret, cowplot, furrr, future, ggrepel, ggplot2, ggpubr,
glmnet, MASS, mixOmics, methods, patchwork, progress, purrr,
Rdpack, scattermore, stats, survcomp, survival, survminer,
svglite, tidyr, utils
Suggests: ggforce, grDevices, knitr, nsROC, RColorConesa, risksetROC,
rmarkdown, smoothROCtime, survivalROC

Depends: R (>= 4.2.0), survival, MASS, stats

Depends: R (>= 3.2.0), MESS, graphics, stats, multtest, qvalue, limma

Depends: R (>= 3.2)
Imports: tcltk, grDevices, graphics, stats, utils

Depends: R (>= 3.5)
Imports: bslib, cli, dplyr, edgeR, ggplot2, grDevices, magrittr,
matrixStats, mgcv, mvnfast, parallel, pbmcapply, purrr,
RColorBrewer, rlang, scam, shiny, shinyjs, stats, stringr,
tidyr, tximport
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)

Imports: MASS, stats, forestplot, grDevices, purrr, mvtnorm

Imports: hypergeo, Rdpack, dgof, graphics

Imports: glmnet, e1071, randomForest, nnet, rda, xgboost, foreach,
doParallel, doRNG

Depends: R (>= 3.5)
Imports: data.table, stringr, osfr, lubridate, deflateBR, curl

Imports: foreach, mlr3, lgr, knockoff
Suggests: mlr3learners, ranger, glmnet, testthat (>= 3.0.0), knitr,
rmarkdown, doParallel