Suggests: DESeq2 (>= 1.40.0), S4Vectors (>= 0.44.0),
SummarizedExperiment (>= 1.36.0), MASS (>= 7.3), corpcor (>=
1.6.0), testthat (>= 3.0.0), Matrix (>= 1.7), sparsesvd (>=
0.2), knitr (>= 1.50), rmarkdown, BiocManager, remotes,
tidyverse (>= 2.0.0)

Depends: R (>= 3.1.0)
Imports: Rcpp (>= 0.11.2), scales (>= 0.4.0), magrittr (>= 1.5),
combinat
LinkingTo: Rcpp
Suggests: knitr, rmarkdown(>= 1.6), circlize, testthat (>= 0.9.0)

Imports: dplyr, ggplot2, grDevices, grid, magrittr, patchwork, rlang,
scales, sf, stringr, utils, data.table, DT

Depends: R (>= 4.0.0), nnet, MASS, Rsolnp, nlme

Imports: raster, methods, sp, sf, terra, utils, grDevices, xml2,
jsonlite, adehabitatLT, adehabitatHR

Imports: Rdpack, stats, mvnfast, glmmTMB, dplyr, multidplyr, ggplot2,
scales

Imports: classInt, dplyr, english, ndi, rlang, sf, sociome, stringr,
tibble, tidycensus, tidyselect, tidyr, zippeR

Depends: R (>= 3.0.0), ggplot2, Rcpp (>= 0.11.2), rrcov, methods, MASS,
np
Imports: lattice, sm, geometry, colorspace, zoo, grDevices
LinkingTo: Rcpp, RcppArmadillo
Suggests: mvtnorm, rgl, sn, robustbase, dplyr, RcppArmadillo, xts,
covr, testthat, fda, lintr, roxygen2, pkgbuild

Imports: Rfast, Rfast2, Rcpp, RcppParallel, stats

Depends: R (>= 3.0.0)
Imports: graphics, stats, grDevices, mnormt
Suggests: markdown, knitr, rmarkdown, ggplot2, dplyr, tidyr, pander,
bookdown

Depends: R (>= 4.1.0)
Imports: dplyr, purrr, zoo, ggplot2, gridExtra, rlang, scales
Suggests: knitr, rmarkdown, cli, fansi, farver, utf8, devtools,
testthat (>= 3.0.0)

Suggests: callr, covr, gh, spelling, testthat, whoami, withr

Depends: R (>= 4.0.0)
Imports: rentrez, ComplexHeatmap, circlize, STRINGdb, data.table,
igraph, ggplot2, openxlsx, dplyr, tidyr, magrittr, tibble,
ggrepel
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, withr

Imports: xtable, utils, grDevices, graphics, stats

Imports: dplyr (>= 0.7), forcats, tibble, tidyr, purrr, broom, stringr,
haven, ggplot2, lmtest, rlang
Suggests: testthat

Imports: dplyr, e1071, psych, fNonlinear, tseries

Imports: reshape2, ggplot2 (>= 3.4.1), plyr, scales, grid, GGally (>=
2.1.2)
Suggests: testthat