Depends: R (>= 2.10)
Imports: DESeq2, futile.logger, ggplot2, ggsci, plyr, VennDiagram

Depends: R (>= 4.1.0), dm
Imports: xml2, tibble, stringr, dplyr, cli, data.tree, rlang
Suggests: knitr, rmarkdown, here, DiagrammeR, DiagrammeRsvg, testthat
(>= 3.0.0), parallel, waldo

Suggests: knitr, rmarkdown, testthat (>= 3.0.0), ggplot2, tibble,
ComplexHeatmap, clusterProfiler, org.At.tair.db, BiocStyle,
RColorBrewer, genefilter, DT

Imports: dplyr (>= 1.1.0), magrittr, methods, rlang, survey (>= 4.1),
tibble, tidyr, tidyselect, vctrs (>= 0.3.0)
Suggests: spelling, convey, DBI, dbplyr, ggplot2, knitr, laeken,
Matrix, rmarkdown (>= 2.2.2), pander, RSQLite, survival,
testthat, covr

Imports: foreach, r4ss (>= 1.35.0), gtools, ggplot2, bbmle, grDevices,
graphics, stats, utils

Depends: tsBSS (>= 0.5.3), ICtest (>= 0.3-4), JADE (>= 2.0-2), BSSprep,
ggplot2
Imports: xts, zoo

Suggests: caret, e1071, C50, kernlab, testthat, timeDate, stringi,
R.rsp

Depends: R (>= 4.1.0)
Imports: actuar, config (>= 0.3.1), fitdistrplus (>= 1.1-11), ggplot2,
golem (>= 0.3.5), htmltools, htmlwidgets, jsonlite,
rhandsontable, rlang, rmarkdown, shiny (>= 1.7.4), shinybusy,
shinyjs, stats, utils
Suggests: knitr, remotes, spelling, testthat (>= 3.0.0)

Depends: R (>= 3.5.0)
Imports: GSVA, dplyr, purrr, stringr, tibble, vctrs, stats, tidyselect,
utils, clusterProfiler, org.Hs.eg.db
Suggests: knitr, rmarkdown, testthat (>= 3.0.0),

Suggests: testthat, knitr, rmarkdown, shinyFiles

Depends: R (>= 4.1)
Imports: abind, chk, furrr, generics, ggplot2, ggtext, glue, goftest,
graphics, grid, lifecycle, parallel, plyr, purrr, Rcpp, readr,
rlang, scales, ssddata, stats, stringr, tibble, TMB,
universals, utils
LinkingTo: Rcpp, RcppEigen, TMB
Suggests: actuar, covr, dplyr, EnvStats, extraDistr, fitdistrplus,
grDevices, knitr, latex2exp, magrittr, mle.tools, patchwork,
reshape2, rmarkdown, testthat (>= 3.0.0), tidyr, tidyselect,
tinytex, VGAM, withr

Imports: magrittr, purrr, R6, rlang, stringr

Depends: Matrix, maxLik, spdep (>= 1.1-1), sp, spatialreg (>= 1.1-1)
Suggests: R.rsp