Provides common functionality for the 'dynverse' packages. 
  'dynverse' is created to support the development, execution, and benchmarking of trajectory inference methods.
  For more information, check out <https://dynverse.org>.

Provides functionality to infer trajectories from single-cell data,
  represent them into a common format, and adapt them. Other biological information
  can also be added, such as cellular grouping, RNA velocity and annotation.
  Saelens et al. (2019) <doi:10.1038/s41587-019-0071-9>.

Scripting of structural equation models via 'lavaan' for
    Dyadic Data Analysis, and helper functions for supplemental
    calculations, tabling, and model visualization.  Current models
    supported include Dyadic Confirmatory Factor Analysis, the Actor–Partner 
    Interdependence Model (observed and latent), the Common Fate Model
    (observed and latent), Mutual Influence Model (latent), and the Bifactor
    Dyadic Model (latent).

It is used to identify dysregulated pathways based on a pre-ranked gene pair list. A fast algorithm is used to make the computation really fast. The data in package 'DysPIAData' is needed.

This dataset includes Background and Pathway data used in package 'DysPIA'.

In practice, we will encounter problems where the longitudinal performance of processes needs to be monitored over time. 
  Dynamic screening systems (DySS) are methods that aim to identify and give signals to processes with poor performance as early as possible. 
  This package is designed to implement dynamic screening systems and the related methods.
  References:
  Qiu, P. and Xiang, D. (2014) <doi:10.1080/00401706.2013.822423>;
  Qiu, P. and Xiang, D. (2015) <doi:10.1002/sim.6477>;
  Li, J. and Qiu, P. (2016) <doi:10.1080/0740817X.2016.1146423>;
  Li, J. and Qiu, P. (2017) <doi:10.1002/qre.2160>;
  You, L. and Qiu, P. (2019) <doi:10.1080/00949655.2018.1552273>;
  Qiu, P., Xia, Z., and You, L. (2020) <doi:10.1080/00401706.2019.1604434>;
  You, L., Qiu, A., Huang, B., and Qiu, P. (2020) <doi:10.1002/bimj.201900127>;
  You, L. and Qiu, P. (2021) <doi:10.1080/00224065.2020.1767006>.