Depends: R (>= 3.5.0), survival, stats, graphics, ggplot2, Rcpp,
RcppArmadillo, methods
LinkingTo: Rcpp, RcppArmadillo

Imports: shiny, htmltools, jsonlite, scales

Depends: R (>= 3.5.0), gnm
Imports: VCA, MASS, utils, stats, graphics, grDevices, methods
Suggests: RUnit, knitr, rmarkdown, prettydoc

Imports: stats, graphics, e1071, nleqslv (>= 3.3.0)

Suggests: testthat, knitr, rmarkdown, onion

Depends: R (>= 4.1.0), methods, stats, stats4, splines

Depends: R (>= 4.0.0), methods, stats, VGAM

Depends: R (>= 4.2.0), methods, stats, stats4, VGAM(>= 1.1-1)
Suggests: VGAMdata

Depends: R (>= 3.0.2)
Imports: Rcpp (>= 1.0.1), lme4, CholWishart, mvtnorm, Matrix, stats,
graphics, methods, lmtest, splines, mgcv
LinkingTo: Rcpp, RcppEigen (>= 0.3.3.4.0)
Suggests: SuperLearner, MASS, tictoc, testthat, gKRLS

Imports: Biostrings, coRdon , ggplot2, seqinr, stringr
Suggests: testthat

Suggests: ape, plotrix, parallel, seqinr, gtools

Suggests: tinytest, knitr, rmarkdown, terra, sp, sf

Imports: httr, jsonlite, dplyr, askpass, stringr, mime

Imports: utf8, crul, jsonlite, assertthat, magrittr, stringr, tibble,
tidyr, purrr, dplyr, rlang

Depends: R (>= 4.0)
Imports: cli, dplyr, extraDistr, ggplot2, golem, knitr, lme4, magrittr,
R2BayesX, rlang, rstudioapi, shiny (>= 1.5), tibble, tidyr,
Suggests: spelling, bayesrules, coda, colorspace, cowplot, faraway,
htmlwidgets, INLA, ISLR, LaplacesDemon, magick, MASS, MCMCpack,
plotly, rmarkdown, pacman, png, spData, stringi

Imports: stats, utils, lubridate, Rcpp, foreach
Suggests: testthat (>= 3.0.0), doParallel

Imports: klaR, matrixStats, mcclust, Rcpp, stats, gtools
Suggests: doParallel, doRNG, foreach, parallel

Imports: cowplot, DT, ggplot2, grDevices, ggpubr, nlme, shiny, stats,
tidyr, utils, numDeriv, stringr, RColorBrewer, scales,
shinyWidgets
Suggests: testthat

Depends: R (>= 3.4.0)
Imports: methods, utils, RANN, Matrix, RSpectra
Suggests: scatterplot3d, knitr, rmarkdown, testthat

Suggests: rmarkdown, knitr, shinytest2, testthat (>= 3.0.0)

Depends: R (>= 4.0)
Imports: shiny (>= 1.6.0), shinyjs, shinythemes, shinyWidgets,
shinydashboard, config (>= 0.3.1), golem (>= 0.3.1), JBrowseR,
dplyr, tidyr, DT, ggplot2, ggpubr, plotly, vroom, abind,
reshape2, markdown, stats, hidecan, purrr
Suggests: testthat (>= 3.0.0), shinytest, rlang, pkgload, vdiffr