Package for data exploration and result presentation. Full 'epicalc' package with data management functions is available at '<https://medipe.psu.ac.th/epicalc/>'.

Contains utilities and functions for the cleaning, processing and
    management of patient level public health data for surveillance
    and analysis held by the UK Health Security Agency, UKHSA.

Mathematical models of infectious diseases in humans and animals.
    Both, deterministic and stochastic models can be simulated and plotted.

Tools to quantify transmissibility throughout
    an epidemic from the analysis of time series of incidence as described in
    Cori et al. (2013) <doi:10.1093/aje/kwt133> and Wallinga and Teunis (2004) 
    <doi:10.1093/aje/kwh255>.

Analysis and visualization of plant disease progress curve data. Functions for
    fitting two-parameter population dynamics models (exponential, monomolecular, logistic
    and Gompertz) to proportion data for single or multiple epidemics using either linear
    or no-linear regression.  Statistical and visual outputs are provided to aid in model
    selection. Synthetic curves can be simulated for any of the models given the parameters.
    See Laurence V. Madden, Gareth Hughes, and Frank van den Bosch (2007) <doi:10.1094/9780890545058>
    for further information on the methods.

This is a collection of assorted functions and examples collected 
    from various projects. Currently we have functionalities for simplifying 
    overlapping time intervals, Charlson comorbidity score constructors for 
    Danish data, getting frequency for multiple variables, getting standardized
    output from logistic and log-linear regressions, sibling design linear 
    regression functionalities a method for calculating the confidence intervals 
    for functions of parameters from a GLM, Bayes equivalent for hypothesis 
    testing with asymptotic Bayes factor, and several help functions for 
    generalized random forest analysis using 'grf'.

The interface package to access data from the
    'EpiGraphDB' <https://epigraphdb.org> platform.
    It provides easy access to the 'EpiGraphDB' platform with functions that
    query the corresponding REST endpoints on the API <https://api.epigraphdb.org>
    and return the response data in the 'tibble' data frame format.