Facilitates the gathering of biodiversity occurrence data 
  from disparate sources. Metadata is managed throughout the process to facilitate 
  reporting and enhanced ability to repeat analyses.

Fits community site occupancy models to environmental DNA
    metabarcoding data collected using spatially-replicated survey design.
    Model fitting results can be used to evaluate and compare the effectiveness
    of species detection to find an efficient survey design.
    Reference: Fukaya et al. (2022) <doi:10.1111/2041-210X.13732>,
    Fukaya and Hasebe (2025) <doi:10.1002/1438-390X.12219>.

The classical and extended occupancy distributions occur in cases where balls are randomly allocated 
    to bins. The PDF, CDF, quantile functions, generation of random variates, and calculating 
    the first four central moments of the distributions are implemented as described in 
    O’Neill (2019) <doi:10.1080/00031305.2019.1699445>.

Perform interactive occupation coding during interviews as
    described in Peycheva, D., Sakshaug, J., Calderwood, L. (2021) <doi:10.2478/jos-2021-0042>
    and Schierholz, M., Gensicke, M., Tschersich, N., Kreuter, F. (2018) <doi:10.1111/rssa.12297>.
    Generate suggestions for occupational categories based on free text
    input, with pre-trained machine learning models in German and a ready-to-use
    shiny application provided for quick and easy data collection.

Implements the algorithm in Chen, Wang and Samworth (2020) <arxiv:2003.03668> for online detection of sudden mean changes in a sequence of high-dimensional observations. It also implements methods by Mei (2010) <doi:10.1093/biomet/asq010>, Xie and Siegmund (2013) <doi:10.1214/13-AOS1094> and Chan (2017) <doi:10.1214/17-AOS1546>.

Supports the analysis of Oceanographic data, including 'ADCP'
    measurements, measurements made with 'argo' floats, 'CTD' measurements,
    sectional data, sea-level time series, coastline and topographic data, etc.
    Provides specialized functions for calculating seawater properties such as
    potential temperature in either the 'UNESCO' or 'TEOS-10' equation of state.
    Produces graphical displays that conform to the conventions of the
    Oceanographic literature. This package is discussed extensively by
    Kelley (2018) "Oceanographic Analysis with R" <doi:10.1007/978-1-4939-8844-0>.