Imports: Biostrings, coRdon , ggplot2, seqinr, stringr
Suggests: testthat

Suggests: ape, plotrix, parallel, seqinr, gtools

Suggests: tinytest, knitr, rmarkdown, terra, sp, sf

Imports: httr, jsonlite, dplyr, askpass, stringr, mime

Imports: utf8, crul, jsonlite, assertthat, magrittr, stringr, tibble,
tidyr, purrr, dplyr, rlang

Depends: R (>= 4.0)
Imports: cli, dplyr, extraDistr, ggplot2, golem, knitr, lme4, magrittr,
R2BayesX, rlang, rstudioapi, shiny (>= 1.5), tibble, tidyr,
Suggests: spelling, bayesrules, coda, colorspace, cowplot, faraway,
htmlwidgets, INLA, ISLR, LaplacesDemon, magick, MASS, MCMCpack,
plotly, rmarkdown, pacman, png, spData, stringi

Imports: stats, utils, lubridate, Rcpp, foreach
Suggests: testthat (>= 3.0.0), doParallel

Imports: klaR, matrixStats, mcclust, Rcpp, stats, gtools
Suggests: doParallel, doRNG, foreach, parallel

Imports: cowplot, DT, ggplot2, grDevices, ggpubr, nlme, shiny, stats,
tidyr, utils, numDeriv, stringr, RColorBrewer, scales,
shinyWidgets
Suggests: testthat

Depends: R (>= 3.4.0)
Imports: methods, utils, RANN, Matrix, RSpectra
Suggests: scatterplot3d, knitr, rmarkdown, testthat

Suggests: rmarkdown, knitr, shinytest2, testthat (>= 3.0.0)

Depends: R (>= 4.0)
Imports: shiny (>= 1.6.0), shinyjs, shinythemes, shinyWidgets,
shinydashboard, config (>= 0.3.1), golem (>= 0.3.1), JBrowseR,
dplyr, tidyr, DT, ggplot2, ggpubr, plotly, vroom, abind,
reshape2, markdown, stats, hidecan, purrr
Suggests: testthat (>= 3.0.0), shinytest, rlang, pkgload, vdiffr

Depends: R (>= 4.2)
Imports: Rcpp, rlang, methods, dplyr, sf, sp, terra, ForestTools (>=
1.0.1), parallel, pbmcapply
LinkingTo: Rcpp
Suggests: testthat (>= 3.0.0), knitr, rmarkdown

Depends: R (>= 4.1.0),
Imports: arrow, cli, dplyr, data.table, fst, ggplot2, glue, gridExtra,
lifecycle, purrr, rlang, stringr, tidyr
Suggests: here, knitr, rmarkdown, testthat (>= 3.0.0), tzdb, vdiffr

Suggests: covr, dplyr, knitr, leaflet, plotly, remotes, rmarkdown,
testthat, roxygen2, pandoc,

Depends: R (>= 4.1.0),colorspace,grid
Imports: car, grDevices, robustbase, stats, sp, vcd, nnet, e1071,
methods, Rcpp, utils, graphics, laeken, ranger, MASS, xgboost,
data.table(>= 1.9.4)
LinkingTo: Rcpp
Suggests: dplyr, tinytest, knitr, mgcv, rmarkdown, reactable, covr,
withr, pdist, enetLTS, robmixglm, stringr