Depends: R (>= 3.6)
Imports: brew, cli (>= 3.3.0), commonmark, desc (>= 1.2.0), knitr,
methods, pkgload (>= 1.0.2), purrr (>= 1.0.0), R6 (>= 2.1.2),
rlang (>= 1.0.6), stringi, stringr (>= 1.0.0), utils, withr,
xml2
LinkingTo: cpp11
Suggests: covr, R.methodsS3, R.oo, rmarkdown (>= 2.16), testthat (>=
3.1.2), yaml

Imports: brio, cli, desc, devtools, rex, rlang, tibble, usethis
Suggests: rstudioapi, testthat (>= 3.0.0)

Imports: brio, codetools, desc, roxygen2
Suggests: covr, testthat (>= 3.0.0), withr

Imports: glue, jsonlite (>= 1.8.6), lzstring (>= 0.1.3), roxygen2 (>=
7.2.0), stringr (>= 0.4)

Suggests: testthat (>= 2.1.0), tinytest (>= 1.1.0), knitr, rmarkdown

Imports: stats, graphics, grDevices, bnlearn, ggplot2, tidyr, ggpubr,
rlang

Imports: plotly, data.table, scales, shiny

Imports: methods, stats, utils, graphics, tools, rlang, R6 (>= 2.5.1),
knitr (>= 1.19), Rcpp (>= 1.0.3)

Depends: R (>= 3.4.0), ipmr (>= 0.0.5)
Imports: curl, ggplot2, magrittr, mvtnorm, purrr, rlang (>= 0.3.0),
rmarkdown, tools, truncdist, utils
Suggests: covr, knitr, maps, roxygen2, testthat

Imports: curl, fs, httr, rlang, terra (>= 1.5-12), utils
Suggests: knitr, covr, raster (>= 3.5-1), testthat (>= 3.0.0),
rmarkdown

Depends: R (>= 3.0), tcltk
Suggests: tkrplot, rgl, sp, geoR, RandomFields, interp, MASS, denstrip,
lattice, sm, maps, mgcv, colorspace, ggplot2

Imports: methods, XML, xml2, Seurat, pbapply, Matrix

Suggests: rmarkdown, devtools, knitr, testthat (>= 3.0.0), usethis

Depends: R (>= 2.15.0), graphics, stats, grDevices
Suggests: survival

Imports: ggplot2, methods, Rcpp (>= 0.12.0), rstan (>= 2.26.0),
rstantools
Suggests: knitr, loo, rmarkdown, testthat

Imports: dplyr, purrr, httr, jsonlite, xml2, bio3d, magrittr, methods,
testthat
Suggests: r3dmol

Imports: doParallel, foreach, parallel, stats

Depends: R (>= 2.10.1), ggplot2, minpack.lm, pracma, ptw

Imports: xts, zoo, boot, RPEIF, RPEGLMEN, RobStatTM

Depends: methods, parallel, R (>= 2.14.0)
Imports: Rcpp (>= 1.0.2), mvtnorm, lifecycle
LinkingTo: Rcpp, RcppEigen
Suggests: testthat, roxygen2, ggplot2, reshape2, gridExtra, numDeriv,
knitr, mirt, markdown