Imports: igraph, doParallel, foreach, grDevices, graphics, utils,
parallel

Imports: DescTools, cli, cmprsk, doParallel, doRNG, foreach, ggplot2,
lcmm, methods, pbapply, pec, prodlim, stringr, survival, zoo

Depends: R (>= 3.5.0)
Imports: assertthat, dplyr, dynutils (>= 1.0.10), ggplot2, ggraph (>=
2.0), ggrepel, GillespieSSA2 (>= 0.2.6), grDevices, grid,
igraph, lmds, Matrix, methods, patchwork, pbapply, purrr, rlang
(>= 0.4.1), stats, tibble, tidygraph, tidyr, utils, viridis
Suggests: anndata, covr, dynwrap (>= 1.2.0), R.rsp, rmarkdown, Seurat,
SingleCellExperiment (>= 1.5.3), SummarizedExperiment, testthat

Suggests: datasets, sandwich, strucchange, TSA

Imports: graphics, MASS, Rcpp, stats, utils, zoo

Imports: magrittr, shiny, ggplot2 (> 2.1.0), plotly, stargazer, dplyr,
compare, BBmisc, broom, rms, survival
Suggests: mgcv

Imports: assertthat, carrier, dplyr, dynutils (>= 1.0.2), magrittr,
purrr, stringr, tibble, tidyr

Depends: R (>= 3.0.0), ggplot2
Imports: MASS, Matrix (>= 1.5-0), numDeriv, xtable, latex2exp, grid,
reshape2, plyr, mice, magrittr, methods, fda, car, stringi,
tibble, deSolve, Rdpack
Suggests: testthat, roxygen2 (>= 3.1), knitr, rmarkdown, RcppGSL

Imports: corrplot, RColorBrewer, ggplot2, reshape2, vegan, foreign,
dplyr

Imports: Rcpp, parallel, RColorBrewer, grDevices, graphics, stats
LinkingTo: Rcpp

Depends: R (>= 3.0.0)
Imports: ggplot2 (>= 1.0.1.9003), grid, gridExtra (>= 2.0.0), MASS

Imports: data.table (>= 1.9.8), ggplot2, grDevices, grid, nleqslv,
splines2, stats, survival

Depends: R (>= 3.0.0)
Imports: assertthat, crayon, desc, dplyr, magrittr, Matrix, methods,
proxyC (>= 0.3.3), purrr, Rcpp, remotes, stringr, tibble
LinkingTo: Rcpp
Suggests: covr, ggplot2, hdf5r (>= 1.3.4), knitr, rmarkdown, testthat

Depends: R (>= 3.0.0)
Imports: assertthat, babelwhale, crayon, dplyr, dynutils (>= 1.0.3),
dynparam, igraph, glue, magrittr, Matrix, methods, purrr (>=
1.0.0), processx, readr, stringr, reshape2, tibble, tidyr, yaml
Suggests: covr, dyndimred, hdf5r, knitr, pkgload, ranger, rmarkdown,
testthat