brainGraph: Graph Theory Analysis of Brain MRI Data

A set of tools for performing graph theory analysis of brain MRI data. It works with data from a Freesurfer analysis (cortical thickness, volumes, local gyrification index, surface area), diffusion tensor tractography data (e.g., from FSL) and resting-state fMRI data (e.g., from DPABI). It contains a graphical user interface for graph visualization and data exploration, along with several functions for generating useful figures.

Version: 2.0.0
Depends: R (≥ 3.0.0), igraph (≥ 1.0.0), RGtk2, cairoDevice
Imports: abind, ade4, boot, data.table, expm, foreach, ggplot2, ggrepel, gridExtra, Hmisc, MASS, Matrix, mediation, methods, oro.nifti, permute, parallel, RcppEigen, scales
Published: 2018-02-06
Author: Christopher G. Watson
Maintainer: Christopher G. Watson <cgwatson at>
License: GPL-3
NeedsCompilation: no
Materials: NEWS
CRAN checks: brainGraph results


Reference manual: brainGraph.pdf
Package source: brainGraph_2.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
OS X El Capitan binaries: r-release: not available
OS X Mavericks binaries: r-oldrel: brainGraph_1.0.0.tgz
Old sources: brainGraph archive


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