dartR.spatial: Applying Landscape Genomic Methods on 'SNP' and 'Silicodart' Data

Provides landscape genomic functions to analyse 'SNP' (single nuclear polymorphism) data, such as least cost path analysis and isolation by distance. Therefore each sample needs to have coordinate data attached (lat/lon) to be able to run most of the functions. 'dartR.spatial' is a package that belongs to the 'dartRverse' suit of packages and depends on 'dartR.base' and 'dartR.data'.

Version: 0.78
Depends: R (≥ 3.5), adegenet (≥ 2.0.0), dartR.base, dartR.data
Imports: methods, utils, crayon, StAMPP, raster, sp, tidyr, vegan, MASS, ggplot2, data.table
Suggests: mmod, dismo, gdistance, gplots, rrBLUP, terra (≥ 1.7-39), sf, PopGenReport
Published: 2023-11-15
Author: Bernd Gruber [aut, cre], Arthur Georges [aut], Jose L. Mijangos [aut], Carlo Pacioni [aut], Peter J. Unmack [ctb], Oliver Berry [ctb]
Maintainer: Bernd Gruber <bernd.gruber at canberra.edu.au>
BugReports: https://groups.google.com/g/dartr?pli=1
License: GPL (≥ 3)
URL: https://green-striped-gecko.github.io/dartR/
NeedsCompilation: no
Citation: dartR.spatial citation info
CRAN checks: dartR.spatial results

Documentation:

Reference manual: dartR.spatial.pdf

Downloads:

Package source: dartR.spatial_0.78.tar.gz
Windows binaries: r-devel: dartR.spatial_0.78.zip, r-release: dartR.spatial_0.78.zip, r-oldrel: dartR.spatial_0.78.zip
macOS binaries: r-release (arm64): dartR.spatial_0.78.tgz, r-oldrel (arm64): dartR.spatial_0.78.tgz, r-release (x86_64): dartR.spatial_0.78.tgz
Old sources: dartR.spatial archive

Reverse dependencies:

Reverse suggests: dartRverse

Linking:

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