2018-11-29 Tobias Abenius * DESCRIPTION: added article reference, bumped version, removed RCytoscape * NAMESPACE: add S3method for bootsize 2018-11-28 Tobias Abenius * NAMESPACE: add S3method for bootsize 2013-08-22 Tobias Abenius * R/epoc.R: change graph plotting to use Rgraphviz instead of igraph * man/: removed igraph mentioned in manual 2012-10-04 Tobias Abenius * R/epoc.R: fix diag-problem with logical sparse matrices. * R/epoc.R: Make plot-functions proper methods * man/: Make plot-functions proper methods * man/epoc.survival.Rd: Some notes on the survival functions 2011-10-26 Tobias Abenius * R/epoc.R: more fixes for nonsquare coef matrices 2011-10-11 Tobias Abenius * R/epoc.R: Drop support for predictorix * man/epoc.Rd: update accordingly 2011-10-04 Tobias Abenius * R/epoc.R: Handle predictorix correctly in epoc * R/epoc.R: Use crossprod() instead of t(X) %*% X etc 2011-06-14 Tobias Abenius * R/epoc.R: plot.EPoC.validation.pred: constrain text within left limit 2011-06-13 Tobias Abenius * R/epoc.R: clip coefficients using thr 2011-05-19 Tobias Abenius * data/synth.rda: unknown values (-99) clipped to 0 * R/epoc.R: add lambda-links loess fit to output * R/epoc.R: logarithmic plot.bootsize 2011-04-19 Tobias Abenius * NAMESPACE: Added survival functions 2011-04-19 Tobias Abenius * DESCRIPTION: lowered version requirement 2011-04-18 Tobias Abenius * epoc.R: updated sparse matrix operations * NAMESPACE: export plot.modelsel, plot.bootsize, plot.EPoC.validation.W, plot.EPoC.validation.pred * plot.EPoC.validation.Rd: manual * plot.modelsel.Rd: manual * epoc.validation.Rd: manual * epoc.bootstrap.Rd: manual * epoc.survival.Rd: manual (need more) 2011-04-08 Tobias Abenius * epoc.R: Use X'y with corresponding zero column to get correct infnorm into lassoshooting * INDEX: verbosity * epoc.Rd : add note about transpose 2011-04-07 Tobias Abenius * epoc.R: Fixed serious bug related to regression Y on U 2011-04-06 Tobias Abenius * epoc.R: Unicode characters instead of utf8 * epoc.Rd: Manual typeset with links and equations. * epoc.R: list handling for epocG, may brake epocA print, summary etc. * plapply.Rd: manual for parallel list apply.