hwde: Models and Tests for Departure from Hardy-Weinberg Equilibrium and Independence Between Loci

Fits models for genotypic disequilibria, as described in Huttley and Wilson (2000) <doi:10.1093/genetics/156.4.2127>, Weir (1996) and Weir and Wilson (1986). Contrast terms are available that account for first order interactions between loci. Also implements, for a single locus in a single population, a conditional exact test for Hardy-Weinberg equilibrium.

Version: 0.67-3
Depends: R (≥ 2.0)
Published: 2023-08-21
Author: John Maindonald, with \code{hwexact()} from Randall Johnson.
Maintainer: John Maindonald <jhmaindonald at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
Copyright: (c) John Curtin Research School of Medical Sciences and Centre for Mathematics and Its Applications, The Australian National University
URL: https://github.com/jhmaindonald/hwde
NeedsCompilation: no
Materials: NEWS
CRAN checks: hwde results


Reference manual: hwde.pdf
Vignettes: hwde: An R Package for Tests and Models for Genotypic Disequilibria


Package source: hwde_0.67-3.tar.gz
Windows binaries: r-devel: hwde_0.67-3.zip, r-release: hwde_0.67-3.zip, r-oldrel: hwde_0.67-3.zip
macOS binaries: r-release (arm64): hwde_0.67-3.tgz, r-oldrel (arm64): hwde_0.67-3.tgz, r-release (x86_64): hwde_0.67-3.tgz
Old sources: hwde archive


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