bpp::HmmStateAlphabet Member List

This is the complete list of members for bpp::HmmStateAlphabet, including all inherited members.

clone() const override=0	bpp::HmmStateAlphabet	pure virtual
getNamespace() const =0	bpp::Parametrizable	pure virtual
getNumberOfParameters() const =0	bpp::Parametrizable	pure virtual
getNumberOfStates() const =0	bpp::HmmStateAlphabet	pure virtual
getParameterNameWithoutNamespace(const std::string &name) const =0	bpp::Parametrizable	pure virtual
getParameters() const =0	bpp::Parametrizable	pure virtual
getParameters_()=0	bpp::Parametrizable	protectedpure virtual
getParameterValue(const std::string &name) const =0	bpp::Parametrizable	pure virtual
getState(size_t stateIndex) const =0	bpp::HmmStateAlphabet	pure virtual
hasParameter(const std::string &name) const =0	bpp::Parametrizable	pure virtual
HmmStateAlphabet()	bpp::HmmStateAlphabet	inline
matchParametersValues(const ParameterList &parameters)=0	bpp::Parametrizable	pure virtual
parameter(const std::string &name) const =0	bpp::Parametrizable	pure virtual
Parametrizable()	bpp::Parametrizable	inline
removeConstraint(const std::string &name)=0	bpp::Parametrizable	pure virtual
setAllParametersValues(const ParameterList &parameters)=0	bpp::Parametrizable	pure virtual
setConstraint(const std::string &name, std::shared_ptr< ConstraintInterface > constraint)=0	bpp::Parametrizable	pure virtual
setNamespace(const std::string &prefix)=0	bpp::Parametrizable	pure virtual
setParametersValues(const ParameterList &parameters)=0	bpp::Parametrizable	pure virtual
setParameterValue(const std::string &name, double value)=0	bpp::Parametrizable	pure virtual
worksWith(const HmmStateAlphabet &stateAlphabet) const =0	bpp::HmmStateAlphabet	pure virtual
~Clonable()=default	bpp::Clonable	virtual
~HmmStateAlphabet()	bpp::HmmStateAlphabet	inlinevirtual
~Parametrizable()	bpp::Parametrizable	inlinevirtual