Here is a list of all class members with links to the classes they belong to:
- r -
- r
: bpp::BrentOneDimension
- r_
: bpp::AdaptiveKernelDensityEstimation
- R_MINUS
: bpp::Parameter
- R_MINUS_STAR
: bpp::Parameter
- R_PLUS
: bpp::Parameter
- R_PLUS_STAR
: bpp::Parameter
- rand()
: bpp::AbstractDiscreteDistribution
, bpp::DirichletDiscreteDistribution
, bpp::DiscreteDistributionInterface
, bpp::MultipleDiscreteDistribution
- randBeta()
: bpp::RandomTools
- randC()
: bpp::AbstractDiscreteDistribution
, bpp::BetaDiscreteDistribution
, bpp::ConstantDistribution
, bpp::DirichletDiscreteDistribution
, bpp::DiscreteDistributionInterface
, bpp::ExponentialDiscreteDistribution
, bpp::GammaDiscreteDistribution
, bpp::GaussianDiscreteDistribution
, bpp::MultipleDiscreteDistribution
, bpp::TruncatedExponentialDiscreteDistribution
, bpp::UniformDiscreteDistribution
- randExponential()
: bpp::RandomTools
- randGamma()
: bpp::RandomTools
- randGaussian()
: bpp::RandomTools
- randMultinomial()
: bpp::RandomTools
- RANDOM_DEVICE
: bpp::RandomTools
- RandomTools()
: bpp::RandomTools
- Range()
: bpp::Range< T >
- range()
: bpp::VectorTools
- ranges_
: bpp::MultiRange< T >
, bpp::RangeSet< T >
- RangeSet()
: bpp::RangeSet< T >
- RColorSet()
: bpp::RColorSet
- rcont2()
: bpp::ContingencyTableGenerator
- read()
: bpp::DataTable
, bpp::Table< T >
- readDescription()
: bpp::IntervalConstraint
- readDiscreteDistribution()
: bpp::BppODiscreteDistributionFormat
, bpp::IDiscreteDistribution
- readFormula()
: bpp::ComputationTree
- readFormula_()
: bpp::ComputationTree
- RED
: bpp::ColorTools
- red_
: bpp::RGBColor
- registerFont_()
: bpp::AbstractFontManager< CodeType >
- registerObserver()
: bpp::GlobalGraph
, bpp::Graph
- removeComments()
: bpp::AttributesTools
- removeConstraint()
: bpp::AbstractParametrizable
, bpp::FunctionWrapper
, bpp::Parameter
, bpp::Parametrizable
, bpp::ParametrizableAdapter
- removeEmptyTokens()
: bpp::StringTokenizer
- removeFather()
: bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >
, bpp::AssociationDAGraphObserver< N, E >
, bpp::DAGraph
, bpp::DAGraphImpl< GraphImpl >
- removeFathers()
: bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >
, bpp::AssociationDAGraphObserver< N, E >
, bpp::DAGraph
, bpp::DAGraphImpl< GraphImpl >
- removeObject()
: bpp::ParametrizableCollection< N >
- removeParameterListener()
: bpp::Parameter
- removeSon()
: bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >
, bpp::AssociationDAGraphObserver< N, E >
, bpp::AssociationTreeGraphImplObserver< N, E, TreeGraphImpl >
, bpp::AssociationTreeGraphObserver< N, E >
, bpp::DAGraph
, bpp::DAGraphImpl< GraphImpl >
, bpp::TreeGraph
, bpp::TreeGraphImpl< GraphImpl >
- removeSons()
: bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >
, bpp::AssociationDAGraphObserver< N, E >
, bpp::AssociationTreeGraphImplObserver< N, E, TreeGraphImpl >
, bpp::AssociationTreeGraphObserver< N, E >
, bpp::DAGraph
, bpp::DAGraphImpl< GraphImpl >
, bpp::TreeGraph
, bpp::TreeGraphImpl< GraphImpl >
- rename()
: bpp::AliasParameterListener
- rep()
: bpp::VectorTools
- ReparametrizationDerivableFirstOrderWrapper()
: bpp::ReparametrizationDerivableFirstOrderWrapper
- ReparametrizationDerivableSecondOrderWrapper()
: bpp::ReparametrizationDerivableSecondOrderWrapper
- ReparametrizationFunctionWrapper()
: bpp::ReparametrizationFunctionWrapper
- replaceObject()
: bpp::ParametrizableCollection< N >
- requiresFirstOrderDerivatives()
: bpp::MetaOptimizerInfos
- requiresSecondOrderDerivatives()
: bpp::MetaOptimizerInfos
- RescaledHmmLikelihood()
: bpp::RescaledHmmLikelihood
- reset()
: bpp::ParameterList
- resetCounter()
: bpp::AbstractOptimizationStopCondition
- resetParameters_()
: bpp::AbstractParameterAliasable
, bpp::AbstractParametrizable
- resize()
: bpp::ColMatrix< Scalar >
, bpp::DownhillSimplexMethod::Simplex
, bpp::LinearMatrix< Scalar >
, bpp::Matrix< Scalar >
, bpp::RowMatrix< Scalar >
- resize2()
: bpp::VectorTools
- resize3()
: bpp::VectorTools
- resize4()
: bpp::VectorTools
- resize_()
: bpp::LinearMatrix< Scalar >
- resolveVariables()
: bpp::AttributesTools
- restrictTo()
: bpp::MultiRange< T >
, bpp::RangeCollection< T >
, bpp::RangeSet< T >
- restrictToConstraint()
: bpp::AbstractDiscreteDistribution
, bpp::ConstantDistribution
, bpp::DiscreteDistributionInterface
, bpp::InvariantMixedDiscreteDistribution
, bpp::MixtureOfDiscreteDistributions
, bpp::SimpleDiscreteDistribution
, bpp::TruncatedExponentialDiscreteDistribution
- revx_()
: bpp::AbstractGraphicDevice
- revy_()
: bpp::AbstractGraphicDevice
- RGBColor()
: bpp::RGBColor
- rhs1_
: bpp::NewtonBacktrackOneDimension
- rhs2_
: bpp::NewtonBacktrackOneDimension
- right_
: bpp::BinaryOperator
- root_
: bpp::GlobalGraph
- rootAt()
: bpp::AssociationDAGraphImplObserver< N, E, DAGraphImpl >
, bpp::AssociationDAGraphObserver< N, E >
, bpp::AssociationTreeGraphImplObserver< N, E, TreeGraphImpl >
, bpp::AssociationTreeGraphObserver< N, E >
, bpp::DAGraph
, bpp::DAGraphImpl< GraphImpl >
, bpp::TreeGraph
, bpp::TreeGraphImpl< GraphImpl >
- row()
: bpp::ColMatrix< Scalar >
, bpp::LinearMatrix< Scalar >
, bpp::Matrix< Scalar >
, bpp::RowMatrix< Scalar >
- rowCoord_
: bpp::DualityDiagram
- RowMatrix()
: bpp::RowMatrix< Scalar >
- rowNames_
: bpp::DataTable
, bpp::Table< T >
- rows_
: bpp::LinearMatrix< Scalar >
- rowWeights_
: bpp::DualityDiagram
- RTransformedParameter()
: bpp::RTransformedParameter