bpp-phyl3  3.0.0
bpp::AbstractSubstitutionRegister Member List

This is the complete list of members for bpp::AbstractSubstitutionRegister, including all inherited members.

AbstractSubstitutionRegister(std::shared_ptr< const StateMapInterface > stateMap, const std::string &name)bpp::AbstractSubstitutionRegisterinline
AbstractSubstitutionRegister(const AbstractSubstitutionRegister &asr)bpp::AbstractSubstitutionRegisterinline
alphabet() const overridebpp::AbstractSubstitutionRegisterinlinevirtual
clone() const =0bpp::SubstitutionRegisterInterfacepure virtual
getAlphabet() const overridebpp::AbstractSubstitutionRegisterinlinevirtual
getName() const overridebpp::AbstractSubstitutionRegisterinlinevirtual
getNumberOfSubstitutionTypes() const =0bpp::SubstitutionRegisterInterfacepure virtual
getStateMap() const overridebpp::AbstractSubstitutionRegisterinlinevirtual
getType(size_t fromState, size_t toState) const =0bpp::SubstitutionRegisterInterfacepure virtual
getTypeName(size_t type) const =0bpp::SubstitutionRegisterInterfacepure virtual
name_bpp::AbstractSubstitutionRegisterprotected
operator=(const AbstractSubstitutionRegister &asr)bpp::AbstractSubstitutionRegisterinline
stateMap() const overridebpp::AbstractSubstitutionRegisterinlinevirtual
stateMap_bpp::AbstractSubstitutionRegisterprotected
SubstitutionRegisterInterface()bpp::SubstitutionRegisterInterfaceinline
~AbstractSubstitutionRegister()bpp::AbstractSubstitutionRegisterinlinevirtual
~Clonable()=defaultbpp::Clonablevirtual
~SubstitutionRegisterInterface()bpp::SubstitutionRegisterInterfaceinlinevirtual