bpp::BppOFrequencySetFormat Member List

This is the complete list of members for bpp::BppOFrequencySetFormat, including all inherited members.

ALL	bpp::BppOFrequencySetFormat	static
alphabetCode_	bpp::BppOFrequencySetFormat	private
BppOFrequencySetFormat(unsigned char alphabetCode, bool verbose, int warn)	bpp::BppOFrequencySetFormat	inline
BppOFrequencySetFormat(const BppOFrequencySetFormat &format)	bpp::BppOFrequencySetFormat	inline
CODON	bpp::BppOFrequencySetFormat	static
DNA	bpp::BppOFrequencySetFormat	static
geneticCode_	bpp::BppOFrequencySetFormat	private
getDataType() const	bpp::IoFrequencySet	inlinevirtual
getFormatDescription() const override	bpp::BppOFrequencySetFormat	inlinevirtual
getFormatName() const override	bpp::BppOFrequencySetFormat	inlinevirtual
getUnparsedArguments() const override	bpp::BppOFrequencySetFormat	inlinevirtual
IFrequencySet()	bpp::IFrequencySet	inline
initialize_(FrequencySetInterface &freqSet, std::shared_ptr< const AlignmentDataInterface > data)	bpp::BppOFrequencySetFormat	private
IOFormat()	bpp::IOFormat
IoFrequencySet()	bpp::IoFrequencySet	inline
NUCLEOTIDE	bpp::BppOFrequencySetFormat	static
OFrequencySet()	bpp::OFrequencySet	inline
operator=(const BppOFrequencySetFormat &format)	bpp::BppOFrequencySetFormat	inline
PROTEIN	bpp::BppOFrequencySetFormat	static
readFrequencySet(std::shared_ptr< const Alphabet > alphabet, const std::string &freqDescription, const std::map< size_t, std::shared_ptr< const AlignmentDataInterface >> &mData, size_t nData, bool parseArguments=true) override	bpp::BppOFrequencySetFormat	virtual
RNA	bpp::BppOFrequencySetFormat	static
setGeneticCode(std::shared_ptr< const GeneticCode > gCode)	bpp::BppOFrequencySetFormat	inline
setVerbose(bool verbose)	bpp::BppOFrequencySetFormat	inline
unparsedArguments_	bpp::BppOFrequencySetFormat	private
verbose_	bpp::BppOFrequencySetFormat	private
warningLevel_	bpp::BppOFrequencySetFormat	private
WORD	bpp::BppOFrequencySetFormat	static
writeFrequencySet(const FrequencySetInterface &freqset, OutputStream &out, std::map< std::string, std::string > &globalAliases, std::vector< std::string > &writtenNames) const override	bpp::BppOFrequencySetFormat	virtual
~BppOFrequencySetFormat()	bpp::BppOFrequencySetFormat	inlinevirtual
~IFrequencySet()	bpp::IFrequencySet	inlinevirtual
~IOFormat()	bpp::IOFormat	virtual
~IoFrequencySet()	bpp::IoFrequencySet	inlinevirtual
~OFrequencySet()	bpp::OFrequencySet	inlinevirtual