bpp::DecompositionMethods Member List

This is the complete list of members for bpp::DecompositionMethods, including all inherited members.

bMatrices_	bpp::DecompositionMethods	protected
clone() const	bpp::DecompositionMethods	inline
computeExpectations(RowMatrix< double > &mapping, double length) const	bpp::DecompositionMethods	protected
computeExpectations(std::vector< RowMatrix< double > > &mappings, double length) const	bpp::DecompositionMethods	protected
computeProducts_()	bpp::DecompositionMethods	protected
DecompositionMethods(std::shared_ptr< const SubstitutionModelInterface > model, std::shared_ptr< const SubstitutionRegisterInterface > reg)	bpp::DecompositionMethods
DecompositionMethods(std::shared_ptr< const SubstitutionRegisterInterface > reg)	bpp::DecompositionMethods
DecompositionMethods(std::shared_ptr< const SubstitutionModelInterface > model)	bpp::DecompositionMethods
DecompositionMethods(const StateMapInterface &stateMap)	bpp::DecompositionMethods
DecompositionMethods(const DecompositionMethods &dm)	bpp::DecompositionMethods	inline
initBMatrices_()	bpp::DecompositionMethods	protected
initStates_()	bpp::DecompositionMethods	protected
insideIProducts_	bpp::DecompositionMethods	protected
insideProducts_	bpp::DecompositionMethods	protected
jFunction_(const std::vector< double > &lambda, double t, RowMatrix< double > &result) const	bpp::DecompositionMethods	protected
jFunction_(const std::vector< double > &lambda, const std::vector< double > &ilambda, double t, RowMatrix< double > &result, RowMatrix< double > &iresult) const	bpp::DecompositionMethods	protected
jIMat_	bpp::DecompositionMethods	protected
jMat_	bpp::DecompositionMethods	mutableprotected
leftEigenVectors_	bpp::DecompositionMethods	protected
leftIEigenVectors_	bpp::DecompositionMethods	protected
model_	bpp::DecompositionMethods	protected
nbStates_	bpp::DecompositionMethods	protected
nbTypes_	bpp::DecompositionMethods	protected
operator=(const DecompositionMethods &dm)	bpp::DecompositionMethods	inline
rightEigenVectors_	bpp::DecompositionMethods	protected
rightIEigenVectors_	bpp::DecompositionMethods	protected
setSubstitutionModel(std::shared_ptr< const SubstitutionModelInterface > model)	bpp::DecompositionMethods
~DecompositionMethods()	bpp::DecompositionMethods	inlinevirtual