bpp::EvolutionSequenceSimulator Member List

This is the complete list of members for bpp::EvolutionSequenceSimulator, including all inherited members.

alphabet() const override	bpp::SubstitutionProcessSequenceSimulator	virtual
clone() const	bpp::EvolutionSequenceSimulator	inlinevirtual
EvolutionSequenceSimulator(const SequenceEvolution &evol)	bpp::EvolutionSequenceSimulator
EvolutionSequenceSimulator(const EvolutionSequenceSimulator &ess)	bpp::EvolutionSequenceSimulator	inline
getAlphabet() const override	bpp::SubstitutionProcessSequenceSimulator	virtual
getNumberOfSites() const	bpp::SubstitutionProcessSequenceSimulator	inline
getSequenceNames() const override	bpp::SubstitutionProcessSequenceSimulator	inlinevirtual
mProcess_	bpp::SubstitutionProcessSequenceSimulator	protected
mvPosNames_	bpp::SubstitutionProcessSequenceSimulator	protected
operator=(const EvolutionSequenceSimulator &ess)	bpp::EvolutionSequenceSimulator	inline
bpp::SubstitutionProcessSequenceSimulator::operator=(const SubstitutionProcessSequenceSimulator &)	bpp::SubstitutionProcessSequenceSimulator
outputInternalSequences(bool yn) override	bpp::SubstitutionProcessSequenceSimulator	virtual
resetSiteSimulators(size_t numberOfSites) const	bpp::EvolutionSequenceSimulator
seqEvol_	bpp::EvolutionSequenceSimulator	private
seqNames_	bpp::SubstitutionProcessSequenceSimulator	protected
SequenceSimulatorInterface()	bpp::SequenceSimulatorInterface	inline
setMap(std::vector< size_t > vMap)	bpp::SubstitutionProcessSequenceSimulator
simulate(size_t numberOfSites) const override	bpp::SubstitutionProcessSequenceSimulator	virtual
simulate(const std::vector< double > &rates) const	bpp::SubstitutionProcessSequenceSimulator
simulate(const std::vector< size_t > &states) const	bpp::SubstitutionProcessSequenceSimulator
simulate(const std::vector< double > &rates, const std::vector< size_t > &states) const	bpp::SubstitutionProcessSequenceSimulator
siteSimulator(size_t pos) const override	bpp::SubstitutionProcessSequenceSimulator	inlinevirtual
SubstitutionProcessSequenceSimulator(const SequenceEvolution &evol)	bpp::SubstitutionProcessSequenceSimulator
SubstitutionProcessSequenceSimulator(const SubstitutionProcessSequenceSimulator &)	bpp::SubstitutionProcessSequenceSimulator
vMap_	bpp::SubstitutionProcessSequenceSimulator	mutableprotected
~Clonable()=default	bpp::Clonable	virtual
~EvolutionSequenceSimulator()	bpp::EvolutionSequenceSimulator	inlinevirtual
~SequenceSimulatorInterface()	bpp::SequenceSimulatorInterface	inlinevirtual
~SubstitutionProcessSequenceSimulator()	bpp::SubstitutionProcessSequenceSimulator	inlinevirtual