bpp::GeneralSubstitutionRegister Member List

This is the complete list of members for bpp::GeneralSubstitutionRegister, including all inherited members.

AbstractSubstitutionRegister(std::shared_ptr< const StateMapInterface > stateMap, const std::string &name)	bpp::AbstractSubstitutionRegister	inline
AbstractSubstitutionRegister(const AbstractSubstitutionRegister &asr)	bpp::AbstractSubstitutionRegister	inline
alphabet() const override	bpp::AbstractSubstitutionRegister	inlinevirtual
clone() const override	bpp::GeneralSubstitutionRegister	inlinevirtual
GeneralSubstitutionRegister(std::shared_ptr< const StateMapInterface > stateMap)	bpp::GeneralSubstitutionRegister	inline
GeneralSubstitutionRegister(std::shared_ptr< const StateMapInterface > stateMap, const RowMatrix< size_t > &matrix)	bpp::GeneralSubstitutionRegister	inline
GeneralSubstitutionRegister(const GeneralSubstitutionRegister &gsr)	bpp::GeneralSubstitutionRegister	inline
getAlphabet() const override	bpp::AbstractSubstitutionRegister	inlinevirtual
getName() const override	bpp::AbstractSubstitutionRegister	inlinevirtual
getNumberOfSubstitutionTypes() const override	bpp::GeneralSubstitutionRegister	inlinevirtual
getStateMap() const override	bpp::AbstractSubstitutionRegister	inlinevirtual
getType(size_t i, size_t j) const override	bpp::GeneralSubstitutionRegister	inlinevirtual
getTypeName(size_t type) const override	bpp::GeneralSubstitutionRegister	inlinevirtual
matrix_	bpp::GeneralSubstitutionRegister	protected
name_	bpp::AbstractSubstitutionRegister	protected
operator=(const GeneralSubstitutionRegister &gsr)	bpp::GeneralSubstitutionRegister	inline
bpp::AbstractSubstitutionRegister::operator=(const AbstractSubstitutionRegister &asr)	bpp::AbstractSubstitutionRegister	inline
size_	bpp::GeneralSubstitutionRegister	protected
stateMap() const override	bpp::AbstractSubstitutionRegister	inlinevirtual
stateMap_	bpp::AbstractSubstitutionRegister	protected
SubstitutionRegisterInterface()	bpp::SubstitutionRegisterInterface	inline
types_	bpp::GeneralSubstitutionRegister	protected
updateTypes_()	bpp::GeneralSubstitutionRegister	protected
~AbstractSubstitutionRegister()	bpp::AbstractSubstitutionRegister	inlinevirtual
~Clonable()=default	bpp::Clonable	virtual
~GeneralSubstitutionRegister()	bpp::GeneralSubstitutionRegister	inlinevirtual
~SubstitutionRegisterInterface()	bpp::SubstitutionRegisterInterface	inlinevirtual