bpp-phyl3  3.0.0
bpp::GivenDataSubstitutionProcessSequenceSimulator Member List

This is the complete list of members for bpp::GivenDataSubstitutionProcessSequenceSimulator, including all inherited members.

alphabet() const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
calcul_bpp::GivenDataSubstitutionProcessSequenceSimulatorprivate
clone() const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
getAlphabet() const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
getNumberOfSites() constbpp::GivenDataSubstitutionProcessSequenceSimulatorinline
getSequenceNames() const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
GivenDataSubstitutionProcessSequenceSimulator(std::shared_ptr< LikelihoodCalculationSingleProcess > calcul)bpp::GivenDataSubstitutionProcessSequenceSimulatorinline
GivenDataSubstitutionProcessSequenceSimulator(const GivenDataSubstitutionProcessSequenceSimulator &nhss)bpp::GivenDataSubstitutionProcessSequenceSimulatorinline
outputInternalSequences(bool yn) overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
SequenceSimulatorInterface()bpp::SequenceSimulatorInterfaceinline
simulate() constbpp::GivenDataSubstitutionProcessSequenceSimulatorinline
simulate(size_t numberOfSites) const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorvirtual
siteSimulator(size_t pos) const overridebpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
vSiteSim_bpp::GivenDataSubstitutionProcessSequenceSimulatorprivate
~Clonable()=defaultbpp::Clonablevirtual
~GivenDataSubstitutionProcessSequenceSimulator()bpp::GivenDataSubstitutionProcessSequenceSimulatorinlinevirtual
~SequenceSimulatorInterface()bpp::SequenceSimulatorInterfaceinlinevirtual