bpp::LegacyAbstractSubstitutionMapping Member List

This is the complete list of members for bpp::LegacyAbstractSubstitutionMapping, including all inherited members.

clone() const override=0	bpp::LegacyAbstractSubstitutionMapping	pure virtual
bpp::getBranchLengths() const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::getBranchLengths() const override	bpp::LegacyAbstractMapping	inlinevirtual
getNode(size_t nodeIndex) const	bpp::LegacyAbstractMapping	inlinevirtual
bpp::getNodeIndex(int nodeId) const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::getNodeIndex(int nodeId) const override	bpp::LegacyAbstractMapping	inlinevirtual
bpp::getNumberOfBranches() const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::getNumberOfBranches() const override	bpp::LegacyAbstractMapping	inlinevirtual
bpp::getNumberOfSites() const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::getNumberOfSites() const override	bpp::LegacyAbstractMapping	inlinevirtual
getNumberOfSubstitutionTypes() const =0	bpp::LegacySubstitutionMappingInterface	pure virtual
bpp::getSitePosition(size_t index) const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::getSitePosition(size_t index) const override	bpp::LegacyAbstractMapping	inlinevirtual
bpp::isEmpty() const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::isEmpty() const override	bpp::LegacyAbstractMapping	inlinevirtual
LegacyAbstractMapping(const Tree &tree)	bpp::LegacyAbstractMapping	inline
LegacyAbstractMapping(const LegacyAbstractMapping &absm)	bpp::LegacyAbstractMapping	inline
LegacyAbstractSubstitutionMapping(const Tree &tree)	bpp::LegacyAbstractSubstitutionMapping	inline
LegacyAbstractSubstitutionMapping(const LegacyAbstractSubstitutionMapping &absm)=default	bpp::LegacyAbstractSubstitutionMapping
LegacyMappingInterface()	bpp::LegacyMappingInterface	inline
LegacySubstitutionMappingInterface()	bpp::LegacySubstitutionMappingInterface	inline
nbBranches_	bpp::LegacyAbstractMapping	private
nbSites_	bpp::LegacyAbstractMapping	private
nodes_	bpp::LegacyAbstractMapping	private
operator()(size_t nodeIndex, size_t siteIndex, size_t type)=0	bpp::LegacySubstitutionMappingInterface	pure virtual
operator()(size_t nodeIndex, size_t siteIndex, size_t type) const =0	bpp::LegacySubstitutionMappingInterface	pure virtual
operator=(const LegacyAbstractSubstitutionMapping &absm)=default	bpp::LegacyAbstractSubstitutionMapping
bpp::LegacyAbstractMapping::operator=(const LegacyAbstractMapping &absm)	bpp::LegacyAbstractMapping	inline
setNumberOfSites(size_t numberOfSites)	bpp::LegacyAbstractMapping	inlinevirtual
bpp::setSitePosition(size_t index, int position)=0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::setSitePosition(size_t index, int position) override	bpp::LegacyAbstractMapping	inlinevirtual
setTree(const Tree &tree)	bpp::LegacyAbstractMapping	inline
sitesPositions_	bpp::LegacyAbstractMapping	private
bpp::tree() const =0	bpp::LegacyMappingInterface	pure virtual
bpp::LegacyAbstractMapping::tree() const override	bpp::LegacyAbstractMapping	inlinevirtual
tree_	bpp::LegacyAbstractMapping	private
~Clonable()=default	bpp::Clonable	virtual
~LegacyAbstractMapping()	bpp::LegacyAbstractMapping	inlinevirtual
~LegacyAbstractSubstitutionMapping()	bpp::LegacyAbstractSubstitutionMapping	inlinevirtual
~LegacyMappingInterface()	bpp::LegacyMappingInterface	inlinevirtual
~LegacySubstitutionMappingInterface()	bpp::LegacySubstitutionMappingInterface	inlinevirtual