bpp::MarginalAncestralReconstruction Member List

This is the complete list of members for bpp::MarginalAncestralReconstruction, including all inherited members.

alphabet_	bpp::MarginalAncestralReconstruction	mutableprivate
AncestralStateReconstruction()	bpp::AncestralStateReconstruction	inline
clone() const	bpp::MarginalAncestralReconstruction	inline
getAllAncestralStates() const override	bpp::MarginalAncestralReconstruction	virtual
getAlphabet() const	bpp::MarginalAncestralReconstruction	inline
getAncestralSequenceForNode(uint nodeId, VVdouble *probs, bool sample) const	bpp::MarginalAncestralReconstruction
getAncestralSequenceForNode(uint nodeId) const override	bpp::MarginalAncestralReconstruction	inlinevirtual
getAncestralSequences() const override	bpp::MarginalAncestralReconstruction	inlinevirtual
getAncestralSequences(bool sample) const	bpp::MarginalAncestralReconstruction
getAncestralStatesForNode(uint nodeId, VVdouble &probs, bool sample) const	bpp::MarginalAncestralReconstruction
getAncestralStatesForNode(uint nodeId) const override	bpp::MarginalAncestralReconstruction	inlinevirtual
likelihood_	bpp::MarginalAncestralReconstruction	private
MarginalAncestralReconstruction(std::shared_ptr< LikelihoodCalculationSingleProcess > drl)	bpp::MarginalAncestralReconstruction	inline
MarginalAncestralReconstruction(const MarginalAncestralReconstruction &masr)	bpp::MarginalAncestralReconstruction	inline
nbDistinctSites_	bpp::MarginalAncestralReconstruction	private
nbSites_	bpp::MarginalAncestralReconstruction	private
nbStates_	bpp::MarginalAncestralReconstruction	private
operator=(const MarginalAncestralReconstruction &masr)	bpp::MarginalAncestralReconstruction	inline
recursiveMarginalAncestralStates(const std::shared_ptr< PhyloNode > node, std::map< uint, std::vector< size_t >> &ancestors, AlignmentDataInterface &data) const	bpp::MarginalAncestralReconstruction	private
rootPatternLinks_	bpp::MarginalAncestralReconstruction	private
tree_	bpp::MarginalAncestralReconstruction	private
~AncestralStateReconstruction()	bpp::AncestralStateReconstruction	inlinevirtual
~MarginalAncestralReconstruction()	bpp::MarginalAncestralReconstruction	inlinevirtual