bpp-phyl3
3.0.0
bpp::PhyloBranchMapping Member List
This is the complete list of members for
bpp::PhyloBranchMapping
, including all inherited members.
clone
() const
bpp::PhyloBranchMapping
inline
counts_
bpp::PhyloBranchMapping
protected
deleteLength
()
bpp::PhyloBranch
inline
deleteProperties
()
bpp::PhyloBranch
inline
deleteProperty
(const std::string &name)
bpp::PhyloBranch
inline
getBootstrapValue
() const
bpp::PhyloBranch
inline
getCounts
() const
bpp::PhyloBranchMapping
inline
getCounts
()
bpp::PhyloBranchMapping
inline
getLength
() const
bpp::PhyloBranch
inline
getNumberOfSites
() const
bpp::PhyloBranchMapping
inline
getNumberOfTypes
() const
bpp::PhyloBranchMapping
inline
getProperty
(const std::string &name)
bpp::PhyloBranch
inline
getProperty
(const std::string &name) const
bpp::PhyloBranch
inline
getPropertyNames
() const
bpp::PhyloBranch
inline
getSiteCount
(size_t site)
bpp::PhyloBranchMapping
inline
getSiteCount
(size_t site) const
bpp::PhyloBranchMapping
inline
getSiteTypeCount
(size_t site, size_t type) const
bpp::PhyloBranchMapping
inline
hasBootstrapValue
() const
bpp::PhyloBranch
inline
hasLength
() const
bpp::PhyloBranch
inline
hasProperty
(const std::string &name) const
bpp::PhyloBranch
inline
isLengthDefined_
bpp::PhyloBranch
protected
length_
bpp::PhyloBranch
protected
operator()
(size_t site, size_t type) const
bpp::PhyloBranchMapping
inline
operator()
(size_t site, size_t type)
bpp::PhyloBranchMapping
inline
operator=
(const PhyloBranchMapping &branch)
bpp::PhyloBranchMapping
inline
bpp::PhyloBranch::operator=
(const PhyloBranch &branch)
bpp::PhyloBranch
PhyloBranch
()
bpp::PhyloBranch
inline
PhyloBranch
(double length)
bpp::PhyloBranch
inline
PhyloBranch
(const PhyloBranchParam &branch)
bpp::PhyloBranch
PhyloBranch
(const PhyloBranch &branch)
bpp::PhyloBranch
PhyloBranchMapping
()
bpp::PhyloBranchMapping
inline
PhyloBranchMapping
(double length)
bpp::PhyloBranchMapping
inline
PhyloBranchMapping
(const PhyloBranch &branch)
bpp::PhyloBranchMapping
inline
PhyloBranchMapping
(const PhyloBranchMapping &branch)
bpp::PhyloBranchMapping
inline
properties_
bpp::PhyloBranch
mutable
protected
removeProperties
()
bpp::PhyloBranch
inline
removeProperty
(const std::string &name)
bpp::PhyloBranch
inline
setLength
(double newLength)
bpp::PhyloBranch
inline
setNumberOfSites
(size_t nbSites)
bpp::PhyloBranchMapping
inline
setNumberOfSitesAndTypes
(size_t nbSites, size_t nbTypes)
bpp::PhyloBranchMapping
inline
setNumberOfTypes
(size_t nbTypes)
bpp::PhyloBranchMapping
inline
setProperty
(const std::string &name, const Clonable &property)
bpp::PhyloBranch
inline
setSiteTypeCount
(size_t site, size_t type, double value)
bpp::PhyloBranchMapping
inline
~PhyloBranch
()
bpp::PhyloBranch
inline
virtual
~PhyloBranchMapping
()
bpp::PhyloBranchMapping
inline
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