bpp::RASiteSimulationResult Member List

This is the complete list of members for bpp::RASiteSimulationResult, including all inherited members.

addNode(unsigned int nodeId, MutationPath path)	bpp::SiteSimulationResult	inlinevirtual
alphabet() const	bpp::SiteSimulationResult	inline
ancestralStates_	bpp::SiteSimulationResult	private
currentIndex_	bpp::SiteSimulationResult	private
getAlphabet() const	bpp::SiteSimulationResult	inline
getAncestralState(size_t i) const	bpp::SiteSimulationResult	inlinevirtual
getAncestralState(unsigned int nodeId) const	bpp::SiteSimulationResult	inlinevirtual
getFinalStates() const	bpp::SiteSimulationResult	inlinevirtual
getLeaveNames() const	bpp::SiteSimulationResult	inlinevirtual
getMutationPath(size_t i) const	bpp::SiteSimulationResult	inlinevirtual
getMutationPath(unsigned int nodeId) const	bpp::SiteSimulationResult	inlinevirtual
getRate() const	bpp::RASiteSimulationResult	inlinevirtual
getSite() const	bpp::SiteSimulationResult	inlinevirtual
getSubstitutionCount(size_t i) const	bpp::SiteSimulationResult	inlinevirtual
getSubstitutionCount(size_t i, const SubstitutionRegisterInterface &reg, std::vector< double > &counts) const	bpp::SiteSimulationResult	inlinevirtual
getSubstitutionCount(unsigned int nodeId) const	bpp::SiteSimulationResult	inlinevirtual
getSubstitutionCount(unsigned int nodeId, const SubstitutionRegisterInterface &reg, std::vector< double > &counts) const	bpp::SiteSimulationResult	inlinevirtual
getSubstitutionVector(const SubstitutionRegisterInterface &reg) const	bpp::SiteSimulationResult	inlinevirtual
indexes_	bpp::SiteSimulationResult	mutableprivate
leavesId_	bpp::SiteSimulationResult	private
operator=(const SiteSimulationResult &ssr)	bpp::SiteSimulationResult	inline
paths_	bpp::SiteSimulationResult	private
RASiteSimulationResult(std::shared_ptr< const ParametrizablePhyloTree > tree, std::shared_ptr< const StateMapInterface > stateMap, size_t ancestralStateIndex, double rate)	bpp::RASiteSimulationResult	inline
rate_	bpp::RASiteSimulationResult	protected
SiteSimulationResult(std::shared_ptr< const ParametrizablePhyloTree > tree, std::shared_ptr< const StateMapInterface > statemap, size_t ancestralState)	bpp::SiteSimulationResult	inline
SiteSimulationResult(const SiteSimulationResult &ssr)	bpp::SiteSimulationResult	inline
statemap_	bpp::SiteSimulationResult	private
tree_	bpp::SiteSimulationResult	private
~RASiteSimulationResult()	bpp::RASiteSimulationResult	inlinevirtual
~SiteSimulationResult()	bpp::SiteSimulationResult	inlinevirtual