- w -
- WARD : bpp::HierarchicalClustering
- warningLevel_ : bpp::BppOFrequencySetFormat, bpp::BppOMultiTreeReaderFormat, bpp::BppOMultiTreeWriterFormat, bpp::BppOSubstitutionModelFormat, bpp::BppOTreeReaderFormat, bpp::BppOTreeWriterFormat
- weighted_ : bpp::PGMA
- weights_ : bpp::AbstractSinglePhyloSubstitutionMapping, bpp::AbstractWeightedSubstitutionCount, bpp::BranchLikelihood, bpp::SitePatterns
- withFreq_ : bpp::JCprot
- within_ : bpp::CategorySubstitutionRegister
- WORD : bpp::BppOFrequencySetFormat, bpp::BppOSubstitutionModelFormat
- wordAlphabet_ : bpp::ModelList
- writeId_ : bpp::ExtendedNewick, bpp::Newick