bpp-popgen3
3.0.0
|
This is the complete list of members for bpp::MultilocusGenotypeStatistics, including all inherited members.
countBiAllelicForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
countGametesForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
countHeterozygousForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
countNonMissingForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesFis(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesFit(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesFrqForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesFst(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesFstats(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesIdsForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getAllelesMapForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getDistanceMatrix(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, const std::set< size_t > &groups, std::string distance_method) | bpp::MultilocusGenotypeStatistics | static |
getDnei72(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, size_t grp1, size_t grp2) | bpp::MultilocusGenotypeStatistics | static |
getDnei78(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, size_t grp1, size_t grp2) | bpp::MultilocusGenotypeStatistics | static |
getHeterozygousFrqForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getHexpForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getHnbForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getHobsForGroups(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getRHMultilocusFst(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getVarianceComponents(const PolymorphismMultiGContainer &pmgc, size_t locusPosition, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getWCMultilocusFis(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getWCMultilocusFisAndPerm(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, std::set< size_t > groups, unsigned int nbPerm) | bpp::MultilocusGenotypeStatistics | static |
getWCMultilocusFst(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, const std::set< size_t > &groups) | bpp::MultilocusGenotypeStatistics | static |
getWCMultilocusFstAndPerm(const PolymorphismMultiGContainer &pmgc, std::vector< size_t > locusPositions, std::set< size_t > groups, unsigned int nb_perm) | bpp::MultilocusGenotypeStatistics | static |