bpp-popgen3
3.0.0
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This is the complete list of members for bpp::PopgenlibIO, including all inherited members.
COMA | bpp::PopgenlibIO | static |
data_separator_ | bpp::PopgenlibIO | private |
DIPLOID | bpp::PopgenlibIO | static |
getDataSeparator() const | bpp::PopgenlibIO | |
getDataSeparatorChar() const | bpp::PopgenlibIO | |
getDataType() const | bpp::IODataSet | inlineprivatevirtual |
getFormatDescription() const | bpp::PopgenlibIO | inlinevirtual |
getFormatName() const | bpp::PopgenlibIO | inlinevirtual |
getMissingDataChar() const | bpp::PopgenlibIO | |
getMissingDataSymbol() const | bpp::PopgenlibIO | |
getValues_(std::string ¶m_line, const std::string &delim) | bpp::PopgenlibIO | private |
HAPLODIPLOID | bpp::PopgenlibIO | static |
HAPLOID | bpp::PopgenlibIO | static |
IOFormat() | bpp::IOFormat | |
missing_data_symbol_ | bpp::PopgenlibIO | private |
parseGeneral_(const std::vector< std::string > &in, DataSet &data_set) | bpp::PopgenlibIO | private |
parseIndividual_(const std::vector< std::string > &in, DataSet &data_set, const VectorSequenceContainer &vsc) | bpp::PopgenlibIO | private |
parseLocality_(const std::vector< std::string > &in, DataSet &data_set) | bpp::PopgenlibIO | private |
parseLoci_(const std::vector< std::string > &in, std::vector< LocusInfo > &locus_info) | bpp::PopgenlibIO | private |
parseSequence_(const std::vector< std::string > &in, VectorSequenceContainer &vsc) | bpp::PopgenlibIO | private |
PopgenlibIO() | bpp::PopgenlibIO | |
PopgenlibIO(const std::string &missing_data_symbol, const std::string &data_separator) | bpp::PopgenlibIO | |
read(std::istream &is, DataSet &data_set) | bpp::PopgenlibIO | virtual |
read(const std::string &path, DataSet &data_set) | bpp::PopgenlibIO | virtual |
read(std::istream &is) | bpp::PopgenlibIO | virtual |
read(const std::string &path) | bpp::PopgenlibIO | virtual |
SEMICOLON | bpp::PopgenlibIO | static |
setDataSeparator(const std::string &data_separator) | bpp::PopgenlibIO | |
setMissingDataSymbol(const std::string &missing_data_symbol) | bpp::PopgenlibIO | |
TAB | bpp::PopgenlibIO | static |
UNKNOWN | bpp::PopgenlibIO | static |
WHITESPACE | bpp::PopgenlibIO | static |
write(std::ostream &os, const DataSet &data_set) const | bpp::PopgenlibIO | virtual |
write(const std::string &path, const DataSet &data_set, bool overwrite) const | bpp::PopgenlibIO | virtual |
~AbstractIDataSet() | bpp::AbstractIDataSet | virtual |
~AbstractODataSet() | bpp::AbstractODataSet | virtual |
~IDataSet() | bpp::IDataSet | inlinevirtual |
~IOFormat() | bpp::IOFormat | virtual |
~ODataSet() | bpp::ODataSet | inlinevirtual |
~PopgenlibIO() | bpp::PopgenlibIO |