bpp-seq-omics
2.4.1
bpp::BasicSequenceFeature Member List
This is the complete list of members for
bpp::BasicSequenceFeature
, including all inherited members.
attributes_
bpp::BasicSequenceFeature
mutable
protected
BasicSequenceFeature
()
bpp::BasicSequenceFeature
inline
BasicSequenceFeature
(const std::string &id, const std::string &seqId, const std::string &source, const std::string &type, size_t start, size_t end, char strand, double score=-1)
bpp::BasicSequenceFeature
inline
clone
() const
bpp::BasicSequenceFeature
inline
virtual
getAttribute
(const std::string &attribute) const
bpp::BasicSequenceFeature
inline
virtual
getAttribute
(const std::string &attribute)
bpp::BasicSequenceFeature
inline
virtual
getAttributeList
() const
bpp::BasicSequenceFeature
inline
virtual
getEnd
() const
bpp::BasicSequenceFeature
inline
virtual
getId
() const
bpp::BasicSequenceFeature
inline
virtual
getRange
() const
bpp::BasicSequenceFeature
inline
virtual
getScore
() const
bpp::BasicSequenceFeature
inline
virtual
getSequenceId
() const
bpp::BasicSequenceFeature
inline
virtual
getSource
() const
bpp::BasicSequenceFeature
inline
virtual
getStart
() const
bpp::BasicSequenceFeature
inline
virtual
getType
() const
bpp::BasicSequenceFeature
inline
virtual
id_
bpp::BasicSequenceFeature
protected
includes
(const SeqRange &range) const
bpp::BasicSequenceFeature
inline
virtual
invert
()
bpp::BasicSequenceFeature
inline
virtual
isEmpty
() const
bpp::SequenceFeature
inline
virtual
isIncludedIn
(const SeqRange &range) const
bpp::BasicSequenceFeature
inline
virtual
isNegativeStrand
() const
bpp::BasicSequenceFeature
inline
virtual
isPoint
() const
bpp::SequenceFeature
inline
virtual
isStranded
() const
bpp::BasicSequenceFeature
inline
virtual
NO_ATTRIBUTE_SET
bpp::SequenceFeature
static
overlap
(const SequenceFeature &feat) const
bpp::BasicSequenceFeature
inline
virtual
overlap
(const SeqRange &range) const
bpp::BasicSequenceFeature
inline
virtual
range_
bpp::BasicSequenceFeature
protected
removeAttribute
(const std::string &attribute)
bpp::BasicSequenceFeature
inline
virtual
score_
bpp::BasicSequenceFeature
protected
sequenceId_
bpp::BasicSequenceFeature
protected
setAttribute
(const std::string &attribute, const std::string &value)
bpp::BasicSequenceFeature
inline
virtual
setId
(const std::string &id)
bpp::BasicSequenceFeature
inline
virtual
setScore
(double score)
bpp::BasicSequenceFeature
inline
virtual
setSequenceId
(const std::string &sid)
bpp::BasicSequenceFeature
inline
virtual
setSource
(const std::string &source)
bpp::BasicSequenceFeature
inline
virtual
setType
(const std::string &type)
bpp::BasicSequenceFeature
inline
virtual
size
() const
bpp::SequenceFeature
inline
virtual
source_
bpp::BasicSequenceFeature
protected
type_
bpp::BasicSequenceFeature
protected
~Clonable
()=default
bpp::Clonable
virtual
Generated on Tue Oct 5 2021 17:56:19 for bpp-seq-omics by
1.9.1