attributes_ | bpp::BasicSequenceFeature | mutableprotected |
BasicSequenceFeature() | bpp::BasicSequenceFeature | inline |
BasicSequenceFeature(const std::string &id, const std::string &seqId, const std::string &source, const std::string &type, size_t start, size_t end, char strand, double score=-1) | bpp::BasicSequenceFeature | inline |
clone() const | bpp::BasicSequenceFeature | inlinevirtual |
getAttribute(const std::string &attribute) const | bpp::BasicSequenceFeature | inlinevirtual |
getAttribute(const std::string &attribute) | bpp::BasicSequenceFeature | inlinevirtual |
getAttributeList() const | bpp::BasicSequenceFeature | inlinevirtual |
getEnd() const | bpp::BasicSequenceFeature | inlinevirtual |
getId() const | bpp::BasicSequenceFeature | inlinevirtual |
getRange() const | bpp::BasicSequenceFeature | inlinevirtual |
getScore() const | bpp::BasicSequenceFeature | inlinevirtual |
getSequenceId() const | bpp::BasicSequenceFeature | inlinevirtual |
getSource() const | bpp::BasicSequenceFeature | inlinevirtual |
getStart() const | bpp::BasicSequenceFeature | inlinevirtual |
getType() const | bpp::BasicSequenceFeature | inlinevirtual |
id_ | bpp::BasicSequenceFeature | protected |
includes(const SeqRange &range) const | bpp::BasicSequenceFeature | inlinevirtual |
invert() | bpp::BasicSequenceFeature | inlinevirtual |
isEmpty() const | bpp::SequenceFeature | inlinevirtual |
isIncludedIn(const SeqRange &range) const | bpp::BasicSequenceFeature | inlinevirtual |
isNegativeStrand() const | bpp::BasicSequenceFeature | inlinevirtual |
isPoint() const | bpp::SequenceFeature | inlinevirtual |
isStranded() const | bpp::BasicSequenceFeature | inlinevirtual |
NO_ATTRIBUTE_SET | bpp::SequenceFeature | static |
overlap(const SequenceFeature &feat) const | bpp::BasicSequenceFeature | inlinevirtual |
overlap(const SeqRange &range) const | bpp::BasicSequenceFeature | inlinevirtual |
range_ | bpp::BasicSequenceFeature | protected |
removeAttribute(const std::string &attribute) | bpp::BasicSequenceFeature | inlinevirtual |
score_ | bpp::BasicSequenceFeature | protected |
sequenceId_ | bpp::BasicSequenceFeature | protected |
setAttribute(const std::string &attribute, const std::string &value) | bpp::BasicSequenceFeature | inlinevirtual |
setId(const std::string &id) | bpp::BasicSequenceFeature | inlinevirtual |
setScore(double score) | bpp::BasicSequenceFeature | inlinevirtual |
setSequenceId(const std::string &sid) | bpp::BasicSequenceFeature | inlinevirtual |
setSource(const std::string &source) | bpp::BasicSequenceFeature | inlinevirtual |
setType(const std::string &type) | bpp::BasicSequenceFeature | inlinevirtual |
size() const | bpp::SequenceFeature | inlinevirtual |
source_ | bpp::BasicSequenceFeature | protected |
type_ | bpp::BasicSequenceFeature | protected |
~Clonable()=default | bpp::Clonable | virtual |