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bpp-seq3
3.0.0
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This is the complete list of members for bpp::AbstractISequence, including all inherited members.
| AbstractISequence() | bpp::AbstractISequence | inline |
| appendSequencesFromFile(const std::string &path, SequenceContainerInterface &sc) const | bpp::AbstractISequence | inlineprotectedvirtual |
| appendSequencesFromStream(std::istream &input, SequenceContainerInterface &sc) const =0 | bpp::AbstractISequence | protectedpure virtual |
| getDataType() const | bpp::IOSequence | inlinevirtual |
| getFormatDescription() const=0 | bpp::IOFormat | pure virtual |
| getFormatName() const=0 | bpp::IOFormat | pure virtual |
| IOFormat() | bpp::IOFormat | |
| IOSequence() | bpp::IOSequence | inline |
| ISequence() | bpp::ISequence | inline |
| readSequences(std::istream &input, SequenceContainerInterface &sc) const override | bpp::AbstractISequence | inlinevirtual |
| readSequences(const std::string &path, SequenceContainerInterface &sc) const override | bpp::AbstractISequence | inlinevirtual |
| readSequences(std::istream &input, std::shared_ptr< const Alphabet > alpha) const override | bpp::AbstractISequence | inlinevirtual |
| readSequences(const std::string &path, std::shared_ptr< const Alphabet > alpha) const override | bpp::AbstractISequence | inlinevirtual |
| readSequencesFromFile(const std::string &path, std::shared_ptr< const Alphabet > &alpha) const | bpp::AbstractISequence | inlineprotected |
| readSequencesFromStream(std::istream &input, std::shared_ptr< const Alphabet > &alpha) const | bpp::AbstractISequence | inlineprotected |
| ~AbstractISequence() | bpp::AbstractISequence | inlinevirtual |
| ~IOFormat() | bpp::IOFormat | virtual |
| ~IOSequence() | bpp::IOSequence | inlinevirtual |
| ~ISequence() | bpp::ISequence | inlinevirtual |