bpp-seq3
3.0.0
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This is the complete list of members for bpp::AbstractISequence, including all inherited members.
AbstractISequence() | bpp::AbstractISequence | inline |
appendSequencesFromFile(const std::string &path, SequenceContainerInterface &sc) const | bpp::AbstractISequence | inlineprotectedvirtual |
appendSequencesFromStream(std::istream &input, SequenceContainerInterface &sc) const =0 | bpp::AbstractISequence | protectedpure virtual |
getDataType() const | bpp::IOSequence | inlinevirtual |
getFormatDescription() const=0 | bpp::IOFormat | pure virtual |
getFormatName() const=0 | bpp::IOFormat | pure virtual |
IOFormat() | bpp::IOFormat | |
IOSequence() | bpp::IOSequence | inline |
ISequence() | bpp::ISequence | inline |
readSequences(std::istream &input, SequenceContainerInterface &sc) const override | bpp::AbstractISequence | inlinevirtual |
readSequences(const std::string &path, SequenceContainerInterface &sc) const override | bpp::AbstractISequence | inlinevirtual |
readSequences(std::istream &input, std::shared_ptr< const Alphabet > alpha) const override | bpp::AbstractISequence | inlinevirtual |
readSequences(const std::string &path, std::shared_ptr< const Alphabet > alpha) const override | bpp::AbstractISequence | inlinevirtual |
readSequencesFromFile(const std::string &path, std::shared_ptr< const Alphabet > &alpha) const | bpp::AbstractISequence | inlineprotected |
readSequencesFromStream(std::istream &input, std::shared_ptr< const Alphabet > &alpha) const | bpp::AbstractISequence | inlineprotected |
~AbstractISequence() | bpp::AbstractISequence | inlinevirtual |
~IOFormat() | bpp::IOFormat | virtual |
~IOSequence() | bpp::IOSequence | inlinevirtual |
~ISequence() | bpp::ISequence | inlinevirtual |