bpp-seq3  3.0.0
bpp::AbstractISequence Member List

This is the complete list of members for bpp::AbstractISequence, including all inherited members.

AbstractISequence()bpp::AbstractISequenceinline
appendSequencesFromFile(const std::string &path, SequenceContainerInterface &sc) constbpp::AbstractISequenceinlineprotectedvirtual
appendSequencesFromStream(std::istream &input, SequenceContainerInterface &sc) const =0bpp::AbstractISequenceprotectedpure virtual
getDataType() constbpp::IOSequenceinlinevirtual
getFormatDescription() const=0bpp::IOFormatpure virtual
getFormatName() const=0bpp::IOFormatpure virtual
IOFormat()bpp::IOFormat
IOSequence()bpp::IOSequenceinline
ISequence()bpp::ISequenceinline
readSequences(std::istream &input, SequenceContainerInterface &sc) const overridebpp::AbstractISequenceinlinevirtual
readSequences(const std::string &path, SequenceContainerInterface &sc) const overridebpp::AbstractISequenceinlinevirtual
readSequences(std::istream &input, std::shared_ptr< const Alphabet > alpha) const overridebpp::AbstractISequenceinlinevirtual
readSequences(const std::string &path, std::shared_ptr< const Alphabet > alpha) const overridebpp::AbstractISequenceinlinevirtual
readSequencesFromFile(const std::string &path, std::shared_ptr< const Alphabet > &alpha) constbpp::AbstractISequenceinlineprotected
readSequencesFromStream(std::istream &input, std::shared_ptr< const Alphabet > &alpha) constbpp::AbstractISequenceinlineprotected
~AbstractISequence()bpp::AbstractISequenceinlinevirtual
~IOFormat()bpp::IOFormatvirtual
~IOSequence()bpp::IOSequenceinlinevirtual
~ISequence()bpp::ISequenceinlinevirtual