bpp-seq3  3.0.0
bpp::CodonFromProteicAlphabetIndex2 Member List

This is the complete list of members for bpp::CodonFromProteicAlphabetIndex2, including all inherited members.

alpha_bpp::CodonFromProteicAlphabetIndex2private
alphabet() const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
AlphabetIndex2()bpp::AlphabetIndex2inline
clone() const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
CodonFromProteicAlphabetIndex2(std::shared_ptr< const GeneticCode > gencode, std::shared_ptr< const AlphabetIndex2 > protalphindex)bpp::CodonFromProteicAlphabetIndex2inline
CodonFromProteicAlphabetIndex2(const CodonFromProteicAlphabetIndex2 &cfp)bpp::CodonFromProteicAlphabetIndex2inline
fillIndex_(std::shared_ptr< const AlphabetIndex2 > &protAlphIndex_)bpp::CodonFromProteicAlphabetIndex2inlineprivate
gencode_bpp::CodonFromProteicAlphabetIndex2private
getAlphabet() const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
getIndex(int state1, int state2) const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
getIndex(const std::string &state1, const std::string &state2) const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
getIndexMatrix() const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
isSymmetric() const overridebpp::CodonFromProteicAlphabetIndex2inlinevirtual
isSymmetric_bpp::CodonFromProteicAlphabetIndex2private
operator=(const CodonFromProteicAlphabetIndex2 &cfp)bpp::CodonFromProteicAlphabetIndex2inline
vIndex_bpp::CodonFromProteicAlphabetIndex2private
~AlphabetIndex2()bpp::AlphabetIndex2inlinevirtual
~Clonable()=defaultbpp::Clonablevirtual
~CodonFromProteicAlphabetIndex2()bpp::CodonFromProteicAlphabetIndex2inlinevirtual