bpp-seq3  3.0.0
bpp::MiyataAAChemicalDistance Member List

This is the complete list of members for bpp::MiyataAAChemicalDistance, including all inherited members.

alpha_bpp::ProteicAlphabetIndex2private
alphabet() const overridebpp::ProteicAlphabetIndex2inlinevirtual
AlphabetIndex2()bpp::AlphabetIndex2inline
clone() const overridebpp::MiyataAAChemicalDistanceinlinevirtual
computeIndexMatrix_()bpp::MiyataAAChemicalDistanceprotected
distanceMatrix_bpp::MiyataAAChemicalDistanceprivate
getAlphabet() const overridebpp::ProteicAlphabetIndex2inlinevirtual
getIndex(int state1, int state2) const overridebpp::MiyataAAChemicalDistancevirtual
getIndex(const std::string &state1, const std::string &state2) const overridebpp::MiyataAAChemicalDistancevirtual
getIndexMatrix() const overridebpp::MiyataAAChemicalDistanceinlinevirtual
indexMatrix_bpp::MiyataAAChemicalDistanceprivate
isSymmetric() const overridebpp::MiyataAAChemicalDistanceinlinevirtual
MiyataAAChemicalDistance()bpp::MiyataAAChemicalDistance
MiyataAAChemicalDistance(const MiyataAAChemicalDistance &md)bpp::MiyataAAChemicalDistanceinline
operator=(const MiyataAAChemicalDistance &md)bpp::MiyataAAChemicalDistanceinline
bpp::ProteicAlphabetIndex2::operator=(const ProteicAlphabetIndex2 &pt)bpp::ProteicAlphabetIndex2inline
ProteicAlphabetIndex2()bpp::ProteicAlphabetIndex2inline
ProteicAlphabetIndex2(const ProteicAlphabetIndex2 &pt)bpp::ProteicAlphabetIndex2inline
setSymmetric(bool yn)bpp::MiyataAAChemicalDistanceinline
sym_bpp::MiyataAAChemicalDistanceprivate
~AlphabetIndex2()bpp::AlphabetIndex2inlinevirtual
~Clonable()=defaultbpp::Clonablevirtual
~MiyataAAChemicalDistance()bpp::MiyataAAChemicalDistanceinlinevirtual
~ProteicAlphabetIndex2()bpp::ProteicAlphabetIndex2inlinevirtual