getSourceAlphabet() const override | bpp::NucleicAcidsReplication | inlinevirtual |
getTargetAlphabet() const override | bpp::NucleicAcidsReplication | inlinevirtual |
nuc1_ | bpp::NucleicAcidsReplication | private |
nuc2_ | bpp::NucleicAcidsReplication | private |
NucleicAcidsReplication(std::shared_ptr< const NucleicAlphabet > nuc1, std::shared_ptr< const NucleicAlphabet > nuc2) | bpp::NucleicAcidsReplication | |
NucleicAcidsReplication(const NucleicAcidsReplication &nar) | bpp::NucleicAcidsReplication | inline |
operator=(const NucleicAcidsReplication &nar) | bpp::NucleicAcidsReplication | inline |
reverse(int state) const override | bpp::NucleicAcidsReplication | virtual |
reverse(const std::string &state) const override | bpp::NucleicAcidsReplication | virtual |
reverse(const SequenceInterface &sequence) const override | bpp::NucleicAcidsReplication | virtual |
ReverseTransliteratorInterface() | bpp::ReverseTransliteratorInterface | inline |
sourceAlphabet() const override | bpp::NucleicAcidsReplication | inlinevirtual |
targetAlphabet() const override | bpp::NucleicAcidsReplication | inlinevirtual |
trans_ | bpp::NucleicAcidsReplication | mutableprivate |
translate(int state) const override | bpp::NucleicAcidsReplication | virtual |
translate(const std::string &state) const override | bpp::NucleicAcidsReplication | virtual |
translate(const SequenceInterface &sequence) const override | bpp::NucleicAcidsReplication | virtual |
TransliteratorInterface() | bpp::TransliteratorInterface | inline |
~NucleicAcidsReplication() | bpp::NucleicAcidsReplication | inlinevirtual |
~ReverseTransliteratorInterface() | bpp::ReverseTransliteratorInterface | inlinevirtual |
~TransliteratorInterface() | bpp::TransliteratorInterface | inlinevirtual |