bpp::SequenceQuality Member List

This is the complete list of members for bpp::SequenceQuality, including all inherited members.

afterSequenceChanged(const IntSymbolListEditionEvent &event) override	bpp::SequenceQuality
bpp::SequenceAnnotation::afterSequenceChanged(const CoreSymbolListEditionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
afterSequenceDeleted(const IntSymbolListDeletionEvent &event) override	bpp::SequenceQuality
bpp::SequenceAnnotation::afterSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
afterSequenceInserted(const IntSymbolListInsertionEvent &event) override	bpp::SequenceQuality
bpp::SequenceAnnotation::afterSequenceInserted(const CoreSymbolListInsertionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
afterSequenceSubstituted(const IntSymbolListSubstitutionEvent &event) override	bpp::SequenceQuality	inline
bpp::SequenceAnnotation::afterSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
beforeSequenceChanged(const IntSymbolListEditionEvent &event) override	bpp::SequenceQuality	inline
bpp::SequenceAnnotation::beforeSequenceChanged(const CoreSymbolListEditionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
beforeSequenceDeleted(const IntSymbolListDeletionEvent &event) override	bpp::SequenceQuality	inline
bpp::SequenceAnnotation::beforeSequenceDeleted(const CoreSymbolListDeletionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
beforeSequenceInserted(const IntSymbolListInsertionEvent &event) override	bpp::SequenceQuality	inline
bpp::SequenceAnnotation::beforeSequenceInserted(const CoreSymbolListInsertionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
beforeSequenceSubstituted(const IntSymbolListSubstitutionEvent &event) override	bpp::SequenceQuality	inline
bpp::SequenceAnnotation::beforeSequenceSubstituted(const CoreSymbolListSubstitutionEvent< T > &event)=0	bpp::CoreSymbolListListener< T >	pure virtual
clone() const override	bpp::SequenceQuality	inlinevirtual
DEFAULT_QUALITY_VALUE	bpp::SequenceQuality	static
getPartAnnotation(size_t pos, size_t len) const override	bpp::SequenceQuality	inlinevirtual
getScores() const	bpp::SequenceQuality	inline
getSize() const	bpp::SequenceQuality	inline
getType() const override	bpp::SequenceQuality	inlinevirtual
init(const Sequence &seq) override	bpp::SequenceQuality	inlinevirtual
isRemovable() const override	bpp::SequenceQuality	inlinevirtual
isShared() const override	bpp::SequenceQuality	inlinevirtual
isValidWith(const SequenceWithAnnotation &sequence, bool throwException=true) const override	bpp::SequenceQuality	inlinevirtual
merge(const SequenceAnnotation &anno) override	bpp::SequenceQuality	inlinevirtual
operator[](size_t i) const	bpp::SequenceQuality	inline
operator[](size_t i)	bpp::SequenceQuality	inline
QUALITY_SCORE	bpp::SequenceQuality	static
qualScores_	bpp::SequenceQuality	private
removable_	bpp::SequenceQuality	private
SequenceQuality(size_t size=0, bool removable=true)	bpp::SequenceQuality	inline
SequenceQuality(const std::vector< int > &quality, bool removable=true)	bpp::SequenceQuality	inline
setScore(size_t pos, int score)	bpp::SequenceQuality	inline
setScores(const std::vector< int > &scores)	bpp::SequenceQuality	inline
setScores(size_t pos, const std::vector< int > &scores)	bpp::SequenceQuality	inline
~Clonable()=default	bpp::Clonable	virtual
~CoreSymbolListListener()	bpp::CoreSymbolListListener< T >	inlinevirtual
~SequenceQuality()	bpp::SequenceQuality	inlinevirtual