bpp::SimpleIndexDistance Member List

This is the complete list of members for bpp::SimpleIndexDistance, including all inherited members.

alphabet() const override	bpp::SimpleIndexDistance	inlinevirtual
AlphabetIndex2()	bpp::AlphabetIndex2	inline
clone() const override	bpp::SimpleIndexDistance	inlinevirtual
computeIndexMatrix_()	bpp::SimpleIndexDistance	inlineprotected
getAlphabet() const override	bpp::SimpleIndexDistance	inlinevirtual
getAlphabetIndex1() const	bpp::SimpleIndexDistance	inline
getIndex(int state1, int state2) const override	bpp::SimpleIndexDistance	inlinevirtual
getIndex(const std::string &state1, const std::string &state2) const override	bpp::SimpleIndexDistance	inlinevirtual
getIndexMatrix() const override	bpp::SimpleIndexDistance	inlinevirtual
index_	bpp::SimpleIndexDistance	private
indexMatrix_	bpp::SimpleIndexDistance	private
isSymmetric() const override	bpp::SimpleIndexDistance	inlinevirtual
operator=(const SimpleIndexDistance &sid)	bpp::SimpleIndexDistance	inline
setSymmetric(bool yn)	bpp::SimpleIndexDistance	inline
SimpleIndexDistance(std::shared_ptr< AlphabetIndex1 > index)	bpp::SimpleIndexDistance	inline
SimpleIndexDistance(const SimpleIndexDistance &sid)	bpp::SimpleIndexDistance	inline
size_	bpp::SimpleIndexDistance	private
sym_	bpp::SimpleIndexDistance	private
~AlphabetIndex2()	bpp::AlphabetIndex2	inlinevirtual
~Clonable()=default	bpp::Clonable	virtual
~SimpleIndexDistance()	bpp::SimpleIndexDistance	inlinevirtual