bpp::SiteInterface Member List

This is the complete list of members for bpp::SiteInterface, including all inherited members.

addElement(const std::string &c)=0	bpp::IntSymbolListInterface	pure virtual
addElement(size_t pos, const std::string &c)=0	bpp::IntSymbolListInterface	pure virtual
addElement(const T &c)=0	bpp::IntSymbolListInterface
addElement(size_t pos, const T &c)=0	bpp::IntSymbolListInterface
bpp::TemplateCoreSymbolListInterface::addElement(const T &c)=0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
bpp::TemplateCoreSymbolListInterface::addElement(size_t pos, const T &c)=0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
alphabet() const =0	bpp::CruxSymbolListInterface	pure virtual
clone() const override=0	bpp::SiteInterface	pure virtual
deleteElement(size_t pos)=0	bpp::CruxSymbolListInterface	pure virtual
deleteElements(size_t pos, size_t len)=0	bpp::CruxSymbolListInterface	pure virtual
getAlphabet() const =0	bpp::CruxSymbolListInterface	pure virtual
getChar(size_t pos) const =0	bpp::IntSymbolListInterface	pure virtual
getContent() const =0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
getCoordinate() const =0	bpp::CoreSiteInterface	pure virtual
getElement(size_t pos) const =0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
getStateValueAt(size_t sequencePosition, int state) const override=0	bpp::CoreSiteInterface	pure virtual
getValue(size_t pos) const =0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
IntSymbolListInterface()	bpp::IntSymbolListInterface	inline
operator()(size_t position, int state) const =0	bpp::CruxSymbolListInterface	pure virtual
operator<(const SiteInterface &site)	bpp::SiteInterface	inlinevirtual
operator==(const SiteInterface &site)	bpp::SiteInterface	inlinevirtual
operator[](size_t pos) const =0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
operator[](size_t pos)=0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
setContent(const std::vector< std::string > &list)=0	bpp::IntSymbolListInterface	pure virtual
setContent(const std::vector< T > &list)=0	bpp::IntSymbolListInterface
bpp::TemplateCoreSymbolListInterface::setContent(const std::vector< T > &list)=0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
setCoordinate(int coordinate)=0	bpp::CoreSiteInterface	pure virtual
setElement(size_t pos, const std::string &c)=0	bpp::IntSymbolListInterface	pure virtual
setElement(size_t pos, const T &c)=0	bpp::IntSymbolListInterface
bpp::TemplateCoreSymbolListInterface::setElement(size_t pos, const T &c)=0	bpp::TemplateCoreSymbolListInterface< T >	pure virtual
shuffle()=0	bpp::CruxSymbolListInterface	pure virtual
size() const =0	bpp::CruxSymbolListInterface	pure virtual
SymbolType typedef	bpp::IntSymbolListInterface
toString() const =0	bpp::CruxSymbolListInterface	pure virtual
~Clonable()=default	bpp::Clonable	virtual
~CoreSiteInterface()	bpp::CoreSiteInterface	inlinevirtual
~CruxSymbolListInterface()	bpp::CruxSymbolListInterface	inlinevirtual
~IntSymbolListInterface()	bpp::IntSymbolListInterface	inlinevirtual
~SiteInterface()	bpp::SiteInterface	inlinevirtual
~TemplateCoreSymbolListInterface()	bpp::TemplateCoreSymbolListInterface< T >	inlinevirtual