bpp::Stockholm Member List

This is the complete list of members for bpp::Stockholm, including all inherited members.

AbstractOAlignment()	bpp::AbstractOAlignment	inline
checkNames() const	bpp::Stockholm	inline
checkNames(bool yn)	bpp::Stockholm	inline
checkNames_	bpp::Stockholm	private
getDataType() const	bpp::IOSequence	inlinevirtual
getFormatDescription() const override	bpp::Stockholm	inlinevirtual
getFormatName() const override	bpp::Stockholm	inlinevirtual
IOFormat()	bpp::IOFormat
IOSequence()	bpp::IOSequence	inline
OAlignment()	bpp::OAlignment	inline
Stockholm(bool checkSequenceNames=true)	bpp::Stockholm	inline
writeAlignment(std::ostream &output, const SiteContainerInterface &sc) const override	bpp::Stockholm	virtual
writeAlignment(const std::string &path, const SiteContainerInterface &sc, bool overwrite=true) const override	bpp::Stockholm	inlinevirtual
~AbstractOAlignment()	bpp::AbstractOAlignment	inlinevirtual
~IOFormat()	bpp::IOFormat	virtual
~IOSequence()	bpp::IOSequence	inlinevirtual
~OAlignment()	bpp::OAlignment	inlinevirtual
~Stockholm()	bpp::Stockholm	inlinevirtual