- d -

• DCSE() : bpp::DCSE
• decodeSequence() : bpp::StringSequenceTools
• DefaultAlphabet() : bpp::DefaultAlphabet
• DefaultNucleotideScore() : bpp::DefaultNucleotideScore
• deleteChar() : bpp::StringSequenceTools
• deleteElement() : bpp::AbstractTemplateEventDrivenSymbolList< T > , bpp::AbstractTemplateSymbolList< T > , bpp::CruxSymbolListInterface , bpp::ProbabilisticSymbolList
• deleteElements() : bpp::AbstractTemplateEventDrivenSymbolList< T > , bpp::AbstractTemplateSymbolList< T > , bpp::CruxSymbolListInterface , bpp::ProbabilisticSymbolList
• deleteGeneralComments() : bpp::SequencedValuesContainer
• deleteObject() : bpp::MappedNamedContainer< T > , bpp::NamedContainerInterface< T > , bpp::PositionedContainerInterface< T > , bpp::VectorMappedContainer< T > , bpp::VectorPositionedContainer< T >
• deleteObjects() : bpp::VectorPositionedContainer< T >
• deleteSequence() : bpp::CompressedVectorSiteContainer , bpp::TemplateSequenceDataInterface< HashType > , bpp::TemplateVectorSequenceContainer< SequenceType > , bpp::TemplateVectorSiteContainer< SiteType, SequenceType >
• deleteSite() : bpp::CompressedVectorSiteContainer , bpp::TemplateAlignedSequenceContainer< SequenceType, SiteType > , bpp::TemplateSiteContainerInterface< SiteType, SequenceType, HashType > , bpp::TemplateVectorSiteContainer< SiteType, SequenceType >
• deleteSites() : bpp::CompressedVectorSiteContainer , bpp::TemplateAlignedSequenceContainer< SequenceType, SiteType > , bpp::TemplateAlignmentDataInterface< HashType > , bpp::TemplateSiteContainerInterface< SiteType, SequenceType, HashType > , bpp::TemplateVectorSiteContainer< SiteType, SequenceType >
• DistanceMatrix() : bpp::DistanceMatrix
• DNA() : bpp::DNA
• DNAToRNA() : bpp::DNAToRNA