Here is a list of all class members with links to the classes they belong to:
- n -
- nAlph_
: bpp::CodonAlphabet
- name_
: bpp::AbstractCoreSequence
, bpp::AlphabetState
- NamedContainerInterface()
: bpp::NamedContainerInterface< T >
- names_
: bpp::DistanceMatrix
- namesSplit_
: bpp::Phylip
- nbAlleles_
: bpp::AllelicAlphabet
- nbSpacesBeforeSeq_
: bpp::Clustal
- nbUnknown_
: bpp::AllelicAlphabet
- nextCompleteSitePosition()
: bpp::CompleteTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
- nextSeq_
: bpp::TemplateStreamSequenceIterator< SequenceType >
- nextSequence()
: bpp::Fasta
, bpp::Pasta
, bpp::PhredPhd
, bpp::PhredPoly
, bpp::TemplateISequenceStream< SequenceType >
, bpp::TemplateSequenceIteratorInterface< SequenceType >
, bpp::TemplateStreamSequenceIterator< SequenceType >
- nextSite()
: bpp::CompleteTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
, bpp::NoGapTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
, bpp::SimpleTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
, bpp::TemplateSiteIteratorInterface< SiteType >
- nextSiteWithoutGapPosition()
: bpp::NoGapTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
- NEXUS_FORMAT
: bpp::IoSequenceFactory
- NexusIOSequence()
: bpp::NexusIOSequence
- nocaseAlphabet_
: bpp::CaseMaskedAlphabet
- NoGapTemplateSiteContainerIterator()
: bpp::NoGapTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
- nuc1_
: bpp::NucleicAcidsReplication
- nuc2_
: bpp::NucleicAcidsReplication
- nuclalph_
: bpp::RNY
- NucleicAcidsReplication()
: bpp::NucleicAcidsReplication
- NucleicAlphabet()
: bpp::NucleicAlphabet
- NucleicAlphabetState()
: bpp::NucleicAlphabetState
- nullify()
: bpp::MappedNamedContainer< T >
, bpp::VectorMappedContainer< T >
, bpp::VectorPositionedContainer< T >
- num_
: bpp::AlphabetState
- numberOfDifferences()
: bpp::CodonSiteTools
- numberOfGaps()
: bpp::SymbolListTools
- numberOfNonSynonymousSubstitutions()
: bpp::CodonSiteTools
- numberOfSubstitutions()
: bpp::CodonSiteTools
- numberOfSynonymousDifferences()
: bpp::CodonSiteTools
- numberOfSynonymousPositions()
: bpp::CodonSiteTools
- numberOfUnresolved()
: bpp::SymbolListTools
- NumericAlphabet()
: bpp::NumericAlphabet
- nums_
: bpp::AbstractAlphabet