Here is a list of all class members with links to the classes they belong to:

- p -

• PAML_FORMAT_INTERLEAVED : bpp::IoSequenceFactory
• PAML_FORMAT_SEQUENTIAL : bpp::IoSequenceFactory
• parseDNA_() : bpp::PhredPhd
• parseFile_() : bpp::PhredPhd
• Pasta() : bpp::Pasta
• pdd_ : bpp::NumericAlphabet
• PhredPhd() : bpp::PhredPhd
• PhredPoly() : bpp::PhredPoly
• Phylip() : bpp::Phylip
• PHYLIP_FORMAT : bpp::IODistanceMatrixFactory
• PHYLIP_FORMAT_INTERLEAVED : bpp::IoSequenceFactory
• PHYLIP_FORMAT_SEQUENTIAL : bpp::IoSequenceFactory
• PhylipDistanceMatrixFormat() : bpp::PhylipDistanceMatrixFormat
• piNonSynonymous() : bpp::CodonSiteTools
• piSynonymous() : bpp::CodonSiteTools
• polarity_ : bpp::GranthamAAPolarityIndex
• pos_ : bpp::CoreSymbolListDeletionEvent< T > , bpp::CoreSymbolListInsertionEvent< T >
• PositionedContainerInterface() : bpp::PositionedContainerInterface< T >
• positions_ : bpp::VectorPositionedContainer< T >
• previousCompleteSitePosition() : bpp::CompleteTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
• previousSiteWithoutGapPosition() : bpp::NoGapTemplateSiteContainerIterator< SiteType, SequenceType, HashType >
• ProbabilisticSequence() : bpp::ProbabilisticSequence
• ProbabilisticSite() : bpp::ProbabilisticSite
• ProbabilisticSymbolList() : bpp::ProbabilisticSymbolList
• ProbabilisticSymbolListInterface() : bpp::ProbabilisticSymbolListInterface
• propagateEvents() : bpp::AbstractTemplateEventDrivenSymbolList< T > , bpp::TemplateEventDrivenCoreSymbolListInterface< T >
• propagateEvents_ : bpp::AbstractTemplateEventDrivenSymbolList< T >
• property_ : bpp::AAIndex1Entry , bpp::AAIndex2Entry
• proteicAlphabet() : bpp::GeneticCode
• ProteicAlphabet() : bpp::ProteicAlphabet
• proteicAlphabet_ : bpp::GeneticCode
• ProteicAlphabetIndex1() : bpp::ProteicAlphabetIndex1
• ProteicAlphabetIndex2() : bpp::ProteicAlphabetIndex2
• ProteicAlphabetState() : bpp::ProteicAlphabetState
• PROTEIN_ALPHABET : bpp::AlphabetTools
• pvalue_ : bpp::BowkerTest