Rearranged Oriloc output example: Previous Index Next
Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.
Genome size (bp): 1765118
Number of genes 1895
Oriloc predictions: Origin 122 kb Terminus 920 kb
Worning et al., 2006: Origin 123 kb Terminus 1316 kb
Position(s) of the ORC/Cdc6 gene(s): 122.05 kb, 384.8 kb, 817.96 kb, 1394.99 kb
Consensus predictions: Origin 122 kb Terminus 920 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 509 | 0.04 | 909 |
| GC-skew reverse | 1004 | 0.04 | 114 |
| 1719 | 0.04333 | 1473 | |
| AT-skew forward | 574 | 0 | 1030 |
| AT-skew reverse | 1011 | 0.00333 | 129 |
| 1474 | 0.00333 | 1022 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 509 (908.9725 kb) | leading | 0.146 |
| 510 (910.3845 kb) | 929 (1764.508 kb) | lagging | 0.099 | |
| GC-skew reverse | 930 (0 kb) | 1004 (114.3735 kb) | lagging | -0.171 |
| 1005 (116.976 kb) | 1719 (1473.489 kb) | NA | -0.098 | |
| 1720 (1474.1415 kb) | 1895 (1764.508 kb) | lagging | -0.171 | |
| AT-skew forward | 1 (0 kb) | 574 (1030.3385 kb) | NA | 0.014 |
| 575 (1034.789 kb) | 929 (1764.508 kb) | lagging | 0.127 | |
| AT-skew reverse | 930 (0 kb) | 1011 (128.517 kb) | lagging | 0.001 |
| 1012 (133.1905 kb) | 1474 (1022.3855 kb) | leading | -0.132 | |
| 1475 (1025.8025 kb) | 1895 (1764.508 kb) | lagging | 0.006 |
More G than C on the leading strand for replication - for forward encoded genes.