Rearranged Oriloc output example: Previous Index Next
Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydophila.
Genome size (bp): 1226565
Number of genes 1069
Oriloc predictions: Origin 840 kb Terminus 215 kb
Worning et al., 2006: Origin 840 kb Terminus 217 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 347.669 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 349.9 kb, 470 kb
Consensus predictions: Origin 840 kb Terminus 215 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 110 | NA | 224 |
| 347 | NA | 784 | |
| GC-skew reverse | 603 | NA | 218 |
| 909 | NA | 840 | |
| AT-skew forward | 105 | NA | 207 |
| 368 | NA | 845 | |
| AT-skew reverse | 608 | NA | 221 |
| 787 | NA | 641 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 110 (223.781 kb) | leading | 0.114 |
| 111 (224.701 kb) | 347 (784.23 kb) | lagging | -0.206 | |
| 348 (784.925 kb) | 534 (1226.167 kb) | leading | 0.049 | |
| GC-skew reverse | 535 (0 kb) | 603 (217.719 kb) | leading | 0.182 |
| 604 (218.104 kb) | 909 (840.467 kb) | lagging | -0.105 | |
| 910 (842.2505 kb) | 1069 (1226.167 kb) | leading | 0.132 | |
| AT-skew forward | 1 (0 kb) | 105 (207.229 kb) | leading | -0.128 |
| 106 (210.7325 kb) | 368 (844.557 kb) | lagging | -0.071 | |
| 369 (847.84 kb) | 534 (1226.167 kb) | leading | -0.124 | |
| AT-skew reverse | 535 (0 kb) | 608 (220.858 kb) | leading | 0.066 |
| 609 (221.459 kb) | 787 (640.914 kb) | lagging | 0.174 | |
| 788 (641.568 kb) | 1069 (1226.167 kb) | NA | 0.08 |
More G than C on the leading strand for replication.