Rearranged Oriloc output example: Previous Index Next
Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Corynebacteriaceae; Corynebacterium.
Genome size (bp): 2488635
Number of genes 2264
Oriloc predictions: Origin 11 kb Terminus 1243 kb
Worning et al., 2006: Origin 2472 kb Terminus 1239 kb
Position of the first peak in DnaA box distribution (Mackiewicz et al., 2004): 26.975 kb
Position(s) of the dnaA gene(s) (Mackiewicz et al., 2004): 0.85 kb
Consensus predictions: Origin 0 kb Terminus 1243 kb
Significant breakpoints (p-value <0.05):
| Breakpoints | P-value | Chromosome coordinate (kb) | |
| GC-skew forward | 743 | 0.00667 | 1240 |
| GC-skew reverse | 1584 | 0 | 1238 |
| AT-skew forward | 853 | 0.00667 | 1678 |
| AT-skew reverse | 1476 | 0.02 | 875 |
| 1564 | 0 | 1194 |
| From (index/coord) | To (index/coord) | Strand | Slope | |
| GC-skew forward | 1 (0 kb) | 743 (1239.862 kb) | leading | -0.058 |
| 744 (1249.5765 kb) | 1153 (2487.711 kb) | lagging | -0.175 | |
| GC-skew reverse | 1154 (0 kb) | 1584 (1237.8095 kb) | leading | 0.214 |
| 1585 (1238.62 kb) | 2264 (2487.711 kb) | lagging | 0.023 | |
| AT-skew forward | 1 (0 kb) | 853 (1678.237 kb) | leading | -0.176 |
| 854 (1680.126 kb) | 1153 (2487.711 kb) | lagging | -0.096 | |
| AT-skew reverse | 1154 (0 kb) | 1476 (874.758 kb) | leading | 0.128 |
| 1477 (875.7435 kb) | 1564 (1194.0705 kb) | leading | -0.029 | |
| 1565 (1200.519 kb) | 2264 (2487.711 kb) | lagging | 0.168 |
More G than C on the leading strand for replication.